Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC104758.3-203ENST00000562938 2123 ntBASIC14.78□□□□□ -0.04
SHOX2O60902 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC14.78□□□□□ -0.04
SHOX2O60902 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHOX2O60902 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SHOX2O60902 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHOX2O60902 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.78□□□□□ -0.04
SHOX2O60902 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHOX2O60902 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SHOX2O60902 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.78□□□□□ -0.04
SHOX2O60902 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SHOX2O60902 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.78□□□□□ -0.04
SHOX2O60902 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC14.78□□□□□ -0.04
SHOX2O60902 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.78□□□□□ -0.04
SHOX2O60902 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
SHOX2O60902 SUPT20HL1-201ENST00000436466 2618 ntBASIC14.78□□□□□ -0.04
SHOX2O60902 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHOX2O60902 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHOX2O60902 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.78□□□□□ -0.04
SHOX2O60902 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SHOX2O60902 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.78□□□□□ -0.04
SHOX2O60902 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.78□□□□□ -0.04
SHOX2O60902 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC14.78□□□□□ -0.04
SHOX2O60902 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.78□□□□□ -0.04
SHOX2O60902 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.78□□□□□ -0.04
SHOX2O60902 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC14.78□□□□□ -0.04
SHOX2O60902 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHOX2O60902 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SHOX2O60902 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SHOX2O60902 AC018445.4-201ENST00000624066 2291 ntBASIC14.78□□□□□ -0.04
SHOX2O60902 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHOX2O60902 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC14.78□□□□□ -0.04
SHOX2O60902 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHOX2O60902 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.78□□□□□ -0.04
SHOX2O60902 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC14.78□□□□□ -0.04
SHOX2O60902 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.78□□□□□ -0.04
SHOX2O60902 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC14.78□□□□□ -0.04
SHOX2O60902 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.78□□□□□ -0.04
SHOX2O60902 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHOX2O60902 AL928654.5-201ENST00000624831 2501 ntBASIC14.77□□□□□ -0.04
SHOX2O60902 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SHOX2O60902 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC14.77□□□□□ -0.04
SHOX2O60902 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC14.77□□□□□ -0.04
SHOX2O60902 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SHOX2O60902 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.77□□□□□ -0.04
SHOX2O60902 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SHOX2O60902 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SHOX2O60902 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SHOX2O60902 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
SHOX2O60902 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
SHOX2O60902 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
SHOX2O60902 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SHOX2O60902 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
SHOX2O60902 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SHOX2O60902 AKAP8P1-201ENST00000434743 1349 ntBASIC14.77□□□□□ -0.04
SHOX2O60902 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SHOX2O60902 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
SHOX2O60902 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SHOX2O60902 AC002056.1-201ENST00000395613 760 ntBASIC14.77□□□□□ -0.05
SHOX2O60902 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SHOX2O60902 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.77□□□□□ -0.05
SHOX2O60902 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.77□□□□□ -0.05
SHOX2O60902 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.77□□□□□ -0.05
SHOX2O60902 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.77□□□□□ -0.05
SHOX2O60902 AP002472.1-201ENST00000577490 586 ntBASIC14.77□□□□□ -0.05
SHOX2O60902 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.77□□□□□ -0.05
SHOX2O60902 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SHOX2O60902 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.77□□□□□ -0.05
SHOX2O60902 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SHOX2O60902 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.77□□□□□ -0.05
SHOX2O60902 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SHOX2O60902 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SHOX2O60902 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SHOX2O60902 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
SHOX2O60902 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SHOX2O60902 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SHOX2O60902 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SHOX2O60902 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SHOX2O60902 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SHOX2O60902 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SHOX2O60902 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SHOX2O60902 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
SHOX2O60902 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SHOX2O60902 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.76□□□□□ -0.05
SHOX2O60902 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.76□□□□□ -0.05
SHOX2O60902 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SHOX2O60902 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHOX2O60902 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.76□□□□□ -0.05
SHOX2O60902 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SHOX2O60902 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC14.76□□□□□ -0.05
SHOX2O60902 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SHOX2O60902 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHOX2O60902 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHOX2O60902 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.76□□□□□ -0.05
SHOX2O60902 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SHOX2O60902 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
SHOX2O60902 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHOX2O60902 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC14.76□□□□□ -0.05
SHOX2O60902 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHOX2O60902 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.76□□□□□ -0.05
SHOX2O60902 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms