Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AL136295.7-201ENST00000619226 1200 ntBASIC14.85□□□□□ -0.03
SMAD6O43541 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMAD6O43541 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMAD6O43541 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.85□□□□□ -0.03
SMAD6O43541 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.85□□□□□ -0.03
SMAD6O43541 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.85□□□□□ -0.03
SMAD6O43541 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.85□□□□□ -0.03
SMAD6O43541 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMAD6O43541 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMAD6O43541 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SMAD6O43541 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
SMAD6O43541 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SMAD6O43541 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SMAD6O43541 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMAD6O43541 AP001267.2-201ENST00000532619 2086 ntBASIC14.85□□□□□ -0.03
SMAD6O43541 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMAD6O43541 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.84□□□□□ -0.03
SMAD6O43541 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMAD6O43541 MYADML-201ENST00000474610 2147 ntBASIC14.84□□□□□ -0.03
SMAD6O43541 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMAD6O43541 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMAD6O43541 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMAD6O43541 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMAD6O43541 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMAD6O43541 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SMAD6O43541 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMAD6O43541 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMAD6O43541 AC113367.3-201ENST00000508316 1912 ntBASIC14.84□□□□□ -0.03
SMAD6O43541 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.84□□□□□ -0.03
SMAD6O43541 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMAD6O43541 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SMAD6O43541 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SMAD6O43541 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.84□□□□□ -0.03
SMAD6O43541 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
SMAD6O43541 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMAD6O43541 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMAD6O43541 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.84□□□□□ -0.03
SMAD6O43541 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SMAD6O43541 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMAD6O43541 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMAD6O43541 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.84□□□□□ -0.03
SMAD6O43541 SPTLC1P5-201ENST00000450718 252 ntBASIC14.84□□□□□ -0.03
SMAD6O43541 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.84□□□□□ -0.03
SMAD6O43541 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.84□□□□□ -0.03
SMAD6O43541 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMAD6O43541 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.84□□□□□ -0.03
SMAD6O43541 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.84□□□□□ -0.03
SMAD6O43541 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.84□□□□□ -0.03
SMAD6O43541 RN7SL774P-201ENST00000577467 290 ntBASIC14.84□□□□□ -0.03
SMAD6O43541 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.84□□□□□ -0.03
SMAD6O43541 AL132994.2-201ENST00000603120 687 ntBASIC14.84□□□□□ -0.03
SMAD6O43541 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.84□□□□□ -0.03
SMAD6O43541 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.84□□□□□ -0.03
SMAD6O43541 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.84□□□□□ -0.03
SMAD6O43541 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SMAD6O43541 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMAD6O43541 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.84□□□□□ -0.03
SMAD6O43541 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMAD6O43541 AC097359.2-201ENST00000604992 2389 ntBASIC14.84□□□□□ -0.03
SMAD6O43541 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMAD6O43541 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMAD6O43541 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.84□□□□□ -0.03
SMAD6O43541 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.84□□□□□ -0.03
SMAD6O43541 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SMAD6O43541 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SMAD6O43541 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMAD6O43541 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.84□□□□□ -0.03
SMAD6O43541 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMAD6O43541 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.84□□□□□ -0.03
SMAD6O43541 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMAD6O43541 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.84□□□□□ -0.03
SMAD6O43541 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.84□□□□□ -0.03
SMAD6O43541 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMAD6O43541 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
SMAD6O43541 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
SMAD6O43541 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
SMAD6O43541 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SMAD6O43541 AC140479.7-201ENST00000636301 2332 ntBASIC14.83□□□□□ -0.03
SMAD6O43541 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SMAD6O43541 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.83□□□□□ -0.03
SMAD6O43541 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SMAD6O43541 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.83□□□□□ -0.03
SMAD6O43541 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMAD6O43541 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SMAD6O43541 AC215219.1-201ENST00000400706 1817 ntBASIC14.83□□□□□ -0.04
SMAD6O43541 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SMAD6O43541 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMAD6O43541 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMAD6O43541 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.83□□□□□ -0.04
SMAD6O43541 AC125604.1-201ENST00000496255 707 ntBASIC14.83□□□□□ -0.04
SMAD6O43541 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.83□□□□□ -0.04
SMAD6O43541 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.83□□□□□ -0.04
SMAD6O43541 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SMAD6O43541 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.83□□□□□ -0.04
SMAD6O43541 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMAD6O43541 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14.83□□□□□ -0.04
SMAD6O43541 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.83□□□□□ -0.04
SMAD6O43541 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMAD6O43541 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.83□□□□□ -0.04
SMAD6O43541 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms