Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.03■□□□□ -0
RIPK2O43353 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.03■□□□□ -0
RIPK2O43353 INVS-201ENST00000262456 2968 ntTSL 5 BASIC15.03■□□□□ -0
RIPK2O43353 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RIPK2O43353 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
RIPK2O43353 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.03■□□□□ -0
RIPK2O43353 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC15.03■□□□□ -0
RIPK2O43353 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RIPK2O43353 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
RIPK2O43353 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
RIPK2O43353 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RIPK2O43353 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
RIPK2O43353 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
RIPK2O43353 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
RIPK2O43353 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.02■□□□□ -0
RIPK2O43353 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
RIPK2O43353 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RIPK2O43353 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC15.02■□□□□ -0
RIPK2O43353 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RIPK2O43353 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RIPK2O43353 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC15.02■□□□□ -0
RIPK2O43353 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC15.02■□□□□ -0
RIPK2O43353 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC15.02■□□□□ -0
RIPK2O43353 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
RIPK2O43353 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
RIPK2O43353 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC15.02■□□□□ -0
RIPK2O43353 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
RIPK2O43353 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RIPK2O43353 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.02■□□□□ -0
RIPK2O43353 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.02■□□□□ -0
RIPK2O43353 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.02■□□□□ -0
RIPK2O43353 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.02■□□□□ -0
RIPK2O43353 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
RIPK2O43353 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.02■□□□□ -0
RIPK2O43353 AL022342.1-201ENST00000400363 863 ntBASIC15.02■□□□□ -0
RIPK2O43353 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.02■□□□□ -0
RIPK2O43353 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.02■□□□□ -0
RIPK2O43353 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.02■□□□□ -0
RIPK2O43353 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.02■□□□□ -0
RIPK2O43353 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RIPK2O43353 AC125807.1-201ENST00000483097 614 ntBASIC15.02■□□□□ -0
RIPK2O43353 HLA-J-203ENST00000494367 1087 ntBASIC15.02■□□□□ -0
RIPK2O43353 SPDYE18-201ENST00000510091 1050 ntBASIC15.02■□□□□ -0
RIPK2O43353 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.02■□□□□ -0
RIPK2O43353 MIR3687-2-201ENST00000577708 61 ntBASIC15.02■□□□□ -0
RIPK2O43353 AC027612.4-201ENST00000605371 583 ntBASIC15.02■□□□□ -0
RIPK2O43353 MIR3687-1-201ENST00000614492 61 ntBASIC15.02■□□□□ -0
RIPK2O43353 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.02■□□□□ -0
RIPK2O43353 Z92544.3-201ENST00000624747 417 ntBASIC15.02■□□□□ -0
RIPK2O43353 AL603764.1-201ENST00000636452 321 ntBASIC15.02■□□□□ -0
RIPK2O43353 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
RIPK2O43353 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
RIPK2O43353 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
RIPK2O43353 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC15.02□□□□□ -0.01
RIPK2O43353 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC15.02□□□□□ -0.01
RIPK2O43353 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
RIPK2O43353 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
RIPK2O43353 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.02□□□□□ -0.01
RIPK2O43353 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RIPK2O43353 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
RIPK2O43353 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC15.02□□□□□ -0.01
RIPK2O43353 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RIPK2O43353 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RIPK2O43353 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RIPK2O43353 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RIPK2O43353 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RIPK2O43353 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RIPK2O43353 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RIPK2O43353 TUBB8P4-201ENST00000511806 1324 ntBASIC15.01□□□□□ -0.01
RIPK2O43353 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.01□□□□□ -0.01
RIPK2O43353 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RIPK2O43353 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RIPK2O43353 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RIPK2O43353 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RIPK2O43353 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RIPK2O43353 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RIPK2O43353 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RIPK2O43353 RNU1-114P-201ENST00000365297 166 ntBASIC15.01□□□□□ -0.01
RIPK2O43353 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RIPK2O43353 AC092580.3-201ENST00000430932 139 ntBASIC15.01□□□□□ -0.01
RIPK2O43353 EIF3FP3-201ENST00000434851 1086 ntBASIC15.01□□□□□ -0.01
RIPK2O43353 CNN2P2-201ENST00000443536 909 ntBASIC15.01□□□□□ -0.01
RIPK2O43353 CNN2P3-201ENST00000450201 906 ntBASIC15.01□□□□□ -0.01
RIPK2O43353 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
RIPK2O43353 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RIPK2O43353 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.01□□□□□ -0.01
RIPK2O43353 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.01□□□□□ -0.01
RIPK2O43353 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RIPK2O43353 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.01□□□□□ -0.01
RIPK2O43353 AC010327.4-202ENST00000591484 748 ntBASIC15.01□□□□□ -0.01
RIPK2O43353 AL136317.3-201ENST00000618497 906 ntBASIC15.01□□□□□ -0.01
RIPK2O43353 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RIPK2O43353 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.01□□□□□ -0.01
RIPK2O43353 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RIPK2O43353 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RIPK2O43353 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RIPK2O43353 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RIPK2O43353 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
RIPK2O43353 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC15.01□□□□□ -0.01
RIPK2O43353 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms