Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNRC18O15417 AC096677.3-201ENST00000413162 387 ntBASIC15.27■□□□□ 0.04
TNRC18O15417 PGK1P2-201ENST00000431702 1214 ntBASIC15.27■□□□□ 0.04
TNRC18O15417 CSTF3-203ENST00000438862 1132 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TNRC18O15417 RN7SL22P-201ENST00000471800 269 ntBASIC15.27■□□□□ 0.04
TNRC18O15417 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC15.27■□□□□ 0.04
TNRC18O15417 AL352977.2-201ENST00000557101 547 ntTSL 4 BASIC15.27■□□□□ 0.04
TNRC18O15417 RN7SL5P-201ENST00000581458 321 ntBASIC15.27■□□□□ 0.04
TNRC18O15417 AC020909.3-201ENST00000598194 375 ntTSL 3 BASIC15.27■□□□□ 0.04
TNRC18O15417 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNRC18O15417 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNRC18O15417 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TNRC18O15417 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNRC18O15417 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNRC18O15417 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNRC18O15417 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TNRC18O15417 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TNRC18O15417 PCDH8P1-201ENST00000428983 2773 ntBASIC15.27■□□□□ 0.04
TNRC18O15417 PBDC1-202ENST00000373358 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNRC18O15417 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNRC18O15417 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC15.27■□□□□ 0.04
TNRC18O15417 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.27■□□□□ 0.04
TNRC18O15417 C8orf37-AS1-203ENST00000521905 617 ntTSL 5 BASIC15.27■□□□□ 0.04
TNRC18O15417 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC15.27■□□□□ 0.04
TNRC18O15417 AP005203.1-202ENST00000584204 561 ntTSL 4 BASIC15.27■□□□□ 0.04
TNRC18O15417 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TNRC18O15417 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TNRC18O15417 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC15.27■□□□□ 0.03
TNRC18O15417 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
TNRC18O15417 AC018470.1-201ENST00000624790 3129 ntBASIC15.27■□□□□ 0.03
TNRC18O15417 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TNRC18O15417 NR1I2-207ENST00000640105 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TNRC18O15417 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
TNRC18O15417 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TNRC18O15417 SNORA74.2-201ENST00000516496 180 ntBASIC15.27■□□□□ 0.03
TNRC18O15417 PIMREG-209ENST00000576056 833 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
TNRC18O15417 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TNRC18O15417 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TNRC18O15417 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TNRC18O15417 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNRC18O15417 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNRC18O15417 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNRC18O15417 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.26■□□□□ 0.03
TNRC18O15417 OR6N1-201ENST00000335094 1027 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TNRC18O15417 C9orf24-202ENST00000379124 648 ntTSL 3 BASIC15.26■□□□□ 0.03
TNRC18O15417 AP003306.2-201ENST00000400902 485 ntTSL 4 BASIC15.26■□□□□ 0.03
TNRC18O15417 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC15.26■□□□□ 0.03
TNRC18O15417 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.26■□□□□ 0.03
TNRC18O15417 RN7SL2-201ENST00000490232 300 ntBASIC15.26■□□□□ 0.03
TNRC18O15417 AC046168.2-202ENST00000561123 926 ntTSL 3 BASIC15.26■□□□□ 0.03
TNRC18O15417 AC005154.1-202ENST00000578293 999 ntTSL 5 BASIC15.26■□□□□ 0.03
TNRC18O15417 RN7SL4P-201ENST00000584058 295 ntBASIC15.26■□□□□ 0.03
TNRC18O15417 AC008622.3-201ENST00000621170 600 ntBASIC15.26■□□□□ 0.03
TNRC18O15417 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC15.26■□□□□ 0.03
TNRC18O15417 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.26■□□□□ 0.03
TNRC18O15417 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNRC18O15417 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNRC18O15417 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.26■□□□□ 0.03
TNRC18O15417 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
TNRC18O15417 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TNRC18O15417 AC008620.2-201ENST00000510294 1569 ntBASIC15.26■□□□□ 0.03
TNRC18O15417 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNRC18O15417 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
TNRC18O15417 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC15.26■□□□□ 0.03
TNRC18O15417 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNRC18O15417 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC15.26■□□□□ 0.03
TNRC18O15417 TRAIP-202ENST00000469027 1145 ntTSL 5 BASIC15.26■□□□□ 0.03
TNRC18O15417 AC011389.2-201ENST00000514811 365 ntTSL 2 BASIC15.26■□□□□ 0.03
TNRC18O15417 AL669831.3-208ENST00000634337 891 ntTSL 5 BASIC15.26■□□□□ 0.03
TNRC18O15417 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TNRC18O15417 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TNRC18O15417 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TNRC18O15417 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNRC18O15417 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNRC18O15417 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.25■□□□□ 0.03
TNRC18O15417 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TNRC18O15417 PHBP18-201ENST00000546648 813 ntBASIC15.25■□□□□ 0.03
TNRC18O15417 AC245884.8-201ENST00000599382 880 ntBASIC15.25■□□□□ 0.03
TNRC18O15417 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC15.25■□□□□ 0.03
TNRC18O15417 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNRC18O15417 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.25■□□□□ 0.03
TNRC18O15417 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TNRC18O15417 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNRC18O15417 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.25■□□□□ 0.03
TNRC18O15417 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNRC18O15417 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNRC18O15417 NME1-209ENST00000511355 1645 ntTSL 5 BASIC15.25■□□□□ 0.03
TNRC18O15417 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC15.25■□□□□ 0.03
TNRC18O15417 MIR197-201ENST00000384976 75 ntBASIC15.25■□□□□ 0.03
TNRC18O15417 CAPG-204ENST00000409724 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNRC18O15417 RPSAP61-201ENST00000412542 878 ntBASIC15.25■□□□□ 0.03
TNRC18O15417 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC15.25■□□□□ 0.03
TNRC18O15417 RN7SL452P-201ENST00000482923 291 ntBASIC15.25■□□□□ 0.03
TNRC18O15417 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC15.25■□□□□ 0.03
TNRC18O15417 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC15.25■□□□□ 0.03
TNRC18O15417 ADIPOR1P2-201ENST00000554199 820 ntBASIC15.25■□□□□ 0.03
TNRC18O15417 SNHG21-205ENST00000561107 790 ntTSL 2 BASIC15.25■□□□□ 0.03
TNRC18O15417 AC005609.1-201ENST00000625195 617 ntTSL 5 BASIC15.25■□□□□ 0.03
TNRC18O15417 FURIN-208ENST00000640725 224 ntTSL 5 BASIC15.25■□□□□ 0.03
TNRC18O15417 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms