Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 AC004945.1-201ENST00000416738 983 ntBASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 AC005077.2-201ENST00000449786 690 ntBASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 EIF4HP1-201ENST00000453115 687 ntBASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 IGHJ2P-201ENST00000454480 60 ntBASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 NEU3-202ENST00000526068 431 ntTSL 2 BASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 AC005730.2-201ENST00000564549 1184 ntBASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 MIR4683-201ENST00000579659 81 ntBASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
NPIPA2E9PIF3 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 AC013726.1-201ENST00000563747 2285 ntBASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
NPIPA2E9PIF3 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms