Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 AL356585.2-201ENST00000625078 2396 ntBASIC12.68□□□□□ -0.38
TMEM235A6NFC5 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 TIMM17BP1-201ENST00000545713 516 ntBASIC12.68□□□□□ -0.38
TMEM235A6NFC5 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 AC044860.1-202ENST00000559481 777 ntBASIC12.68□□□□□ -0.38
TMEM235A6NFC5 MIR497HG-202ENST00000572453 3838 ntBASIC12.68□□□□□ -0.38
TMEM235A6NFC5 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 COQ4-205ENST00000609948 956 ntTSL 2 BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 AC073548.1-201ENST00000624088 1882 ntBASIC12.68□□□□□ -0.38
TMEM235A6NFC5 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 AC011498.7-201ENST00000624986 2027 ntBASIC12.67□□□□□ -0.38
TMEM235A6NFC5 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 AL645937.2-201ENST00000396808 931 ntBASIC12.67□□□□□ -0.38
TMEM235A6NFC5 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 AL158212.4-201ENST00000624062 1286 ntBASIC12.67□□□□□ -0.38
TMEM235A6NFC5 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 AC011840.2-201ENST00000563063 1520 ntBASIC12.67□□□□□ -0.38
TMEM235A6NFC5 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
TMEM235A6NFC5 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.66□□□□□ -0.38
TMEM235A6NFC5 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms