Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 CETN4P-206ENST00000642099 2168 ntBASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 TOMM22P5-201ENST00000416399 439 ntBASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 HLA-K-203ENST00000430151 1046 ntBASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 HTR5BP-201ENST00000430851 1154 ntBASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 SERBP1P3-201ENST00000459980 809 ntBASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 AC105339.1-204ENST00000636249 355 ntBASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 AC073548.1-201ENST00000624088 1882 ntBASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 AL118506.1-201ENST00000601296 3082 ntBASIC12.73□□□□□ -0.37
MEIS3P1A6NDR6 TCAM1P-207ENST00000485295 1537 ntBASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 MCCD1P2-201ENST00000423228 335 ntBASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 GPS2P2-201ENST00000430745 888 ntBASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 CEND1P1-201ENST00000451006 455 ntBASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 NMU-202ENST00000505262 693 ntTSL 3 BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 AC093520.2-201ENST00000561830 333 ntBASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 AC011498.7-201ENST00000624986 2027 ntBASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms