Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 AC015688.4-201ENST00000580780 1647 ntBASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 AC005840.4-201ENST00000541242 2494 ntBASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 CROCCP4-201ENST00000457096 498 ntBASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 BX088702.1-201ENST00000610784 235 ntBASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 AC006453.4-201ENST00000636949 1252 ntBASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 MYADML-201ENST00000474610 2147 ntBASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CCDC162PA2VCL2 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 AC027601.5-201ENST00000624065 2482 ntBASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 AC079781.5-202ENST00000641784 3743 ntBASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 AC004945.1-201ENST00000416738 983 ntBASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 KRT43P-201ENST00000434019 910 ntBASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 AP001002.3-201ENST00000623482 206 ntBASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms