Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
TRAPPC1Q9Y5R8 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
TRAPPC1Q9Y5R8 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TRAPPC1Q9Y5R8 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TRAPPC1Q9Y5R8 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TRAPPC1Q9Y5R8 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
TRAPPC1Q9Y5R8 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TRAPPC1Q9Y5R8 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
TRAPPC1Q9Y5R8 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
TRAPPC1Q9Y5R8 RNF152P1-201ENST00000397754 604 ntBASIC11.21□□□□□ -0.61
TRAPPC1Q9Y5R8 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
TRAPPC1Q9Y5R8 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
TRAPPC1Q9Y5R8 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC11.21□□□□□ -0.61
TRAPPC1Q9Y5R8 BX276092.5-203ENST00000456199 560 ntBASIC11.21□□□□□ -0.61
TRAPPC1Q9Y5R8 AC092647.4-201ENST00000457211 535 ntBASIC11.21□□□□□ -0.61
TRAPPC1Q9Y5R8 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
TRAPPC1Q9Y5R8 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
TRAPPC1Q9Y5R8 DUT-205ENST00000558813 769 ntTSL 2 BASIC11.21□□□□□ -0.61
TRAPPC1Q9Y5R8 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC11.21□□□□□ -0.61
TRAPPC1Q9Y5R8 AP001269.4-201ENST00000609611 512 ntBASIC11.21□□□□□ -0.61
TRAPPC1Q9Y5R8 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC11.21□□□□□ -0.61
TRAPPC1Q9Y5R8 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
TRAPPC1Q9Y5R8 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC11.21□□□□□ -0.61
TRAPPC1Q9Y5R8 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
TRAPPC1Q9Y5R8 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TRAPPC1Q9Y5R8 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TRAPPC1Q9Y5R8 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
TRAPPC1Q9Y5R8 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC11.21□□□□□ -0.62
TRAPPC1Q9Y5R8 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
TRAPPC1Q9Y5R8 PLEKHG2-203ENST00000425673 8132 ntAPPRIS P2 TSL 2 BASIC11.21□□□□□ -0.62
TRAPPC1Q9Y5R8 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
TRAPPC1Q9Y5R8 AC110048.1-201ENST00000604293 2157 ntBASIC11.21□□□□□ -0.62
TRAPPC1Q9Y5R8 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
TRAPPC1Q9Y5R8 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
TRAPPC1Q9Y5R8 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.62
TRAPPC1Q9Y5R8 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
TRAPPC1Q9Y5R8 FAM131B-203ENST00000409408 5856 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
TRAPPC1Q9Y5R8 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.62
TRAPPC1Q9Y5R8 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
TRAPPC1Q9Y5R8 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
TRAPPC1Q9Y5R8 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
TRAPPC1Q9Y5R8 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
TRAPPC1Q9Y5R8 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
TRAPPC1Q9Y5R8 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
TRAPPC1Q9Y5R8 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
TRAPPC1Q9Y5R8 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 RAD1-203ENST00000382038 5770 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 GPR179-204ENST00000621958 7983 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 HSPA8P5-201ENST00000456928 2069 ntBASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 KRT18P1-202ENST00000452408 1331 ntBASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 SUPT20HL1-201ENST00000436466 2618 ntBASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 MED22-202ENST00000371999 987 ntTSL 3 BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 IGHV3-47-201ENST00000425060 335 ntBASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 EEF1DP4-201ENST00000446006 880 ntBASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 TSPY15P-201ENST00000457163 923 ntBASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 USP36-216ENST00000589424 970 ntTSL 5 BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 AC138894.3-201ENST00000603787 634 ntBASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 AL645728.2-202ENST00000641679 227 ntBASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 AC215219.1-201ENST00000400706 1817 ntBASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 MYRIP-201ENST00000302541 5077 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC11.2□□□□□ -0.62
TRAPPC1Q9Y5R8 TNRC6C-211ENST00000636222 7093 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms