Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPH3AQ9Y2J0 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RPH3AQ9Y2J0 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC13.67□□□□□ -0.22
RPH3AQ9Y2J0 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.67□□□□□ -0.22
RPH3AQ9Y2J0 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RPH3AQ9Y2J0 GOLGA2P4-201ENST00000441462 777 ntBASIC13.67□□□□□ -0.22
RPH3AQ9Y2J0 AL355994.2-201ENST00000447882 704 ntBASIC13.67□□□□□ -0.22
RPH3AQ9Y2J0 CSF2RBP1-201ENST00000447905 391 ntBASIC13.67□□□□□ -0.22
RPH3AQ9Y2J0 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC13.67□□□□□ -0.22
RPH3AQ9Y2J0 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.67□□□□□ -0.22
RPH3AQ9Y2J0 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
RPH3AQ9Y2J0 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.67□□□□□ -0.22
RPH3AQ9Y2J0 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.67□□□□□ -0.22
RPH3AQ9Y2J0 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RPH3AQ9Y2J0 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPH3AQ9Y2J0 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPH3AQ9Y2J0 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPH3AQ9Y2J0 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPH3AQ9Y2J0 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.67□□□□□ -0.22
RPH3AQ9Y2J0 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RPH3AQ9Y2J0 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPH3AQ9Y2J0 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
RPH3AQ9Y2J0 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.67□□□□□ -0.22
RPH3AQ9Y2J0 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.67□□□□□ -0.22
RPH3AQ9Y2J0 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RPH3AQ9Y2J0 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.67□□□□□ -0.22
RPH3AQ9Y2J0 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPH3AQ9Y2J0 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPH3AQ9Y2J0 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.67□□□□□ -0.22
RPH3AQ9Y2J0 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 AHCYP2-201ENST00000430630 1300 ntBASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 BRWD1P1-201ENST00000401091 371 ntBASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 RN7SL190P-201ENST00000582519 257 ntBASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 AL603764.1-201ENST00000636452 321 ntBASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 AC006453.4-201ENST00000636949 1252 ntBASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 CICP20-201ENST00000443330 2801 ntBASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 AC007686.3-201ENST00000619017 3487 ntBASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.66□□□□□ -0.22
RPH3AQ9Y2J0 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 CLUHP2-201ENST00000426660 1303 ntBASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms