Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 AC091046.1-201ENST00000331871 207 ntBASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 NAGK-204ENST00000443872 878 ntTSL 3 BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 IGLV3-15-201ENST00000518356 244 ntBASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 SIGLEC18P-201ENST00000602271 909 ntBASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC16.77■□□□□ 0.28
SYNPO2Q9UMS6 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SYNPO2Q9UMS6 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SYNPO2Q9UMS6 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SYNPO2Q9UMS6 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SYNPO2Q9UMS6 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SYNPO2Q9UMS6 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SYNPO2Q9UMS6 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.77■□□□□ 0.28
SYNPO2Q9UMS6 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SYNPO2Q9UMS6 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.77■□□□□ 0.28
SYNPO2Q9UMS6 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SYNPO2Q9UMS6 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SYNPO2Q9UMS6 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SYNPO2Q9UMS6 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SYNPO2Q9UMS6 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SYNPO2Q9UMS6 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SYNPO2Q9UMS6 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SYNPO2Q9UMS6 GGCT-203ENST00000409144 836 ntTSL 2 BASIC16.77■□□□□ 0.28
SYNPO2Q9UMS6 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC16.77■□□□□ 0.28
SYNPO2Q9UMS6 NOC2LP1-201ENST00000450578 752 ntBASIC16.77■□□□□ 0.28
SYNPO2Q9UMS6 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC16.77■□□□□ 0.28
SYNPO2Q9UMS6 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC16.77■□□□□ 0.28
SYNPO2Q9UMS6 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.77■□□□□ 0.28
SYNPO2Q9UMS6 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SYNPO2Q9UMS6 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
SYNPO2Q9UMS6 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC16.77■□□□□ 0.28
SYNPO2Q9UMS6 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC16.77■□□□□ 0.28
SYNPO2Q9UMS6 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC16.77■□□□□ 0.28
SYNPO2Q9UMS6 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SYNPO2Q9UMS6 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SYNPO2Q9UMS6 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SYNPO2Q9UMS6 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC16.77■□□□□ 0.27
SYNPO2Q9UMS6 HYMAI-201ENST00000635591 3347 ntBASIC16.77■□□□□ 0.27
SYNPO2Q9UMS6 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.77■□□□□ 0.27
SYNPO2Q9UMS6 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SYNPO2Q9UMS6 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
SYNPO2Q9UMS6 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.77■□□□□ 0.27
SYNPO2Q9UMS6 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.77■□□□□ 0.27
SYNPO2Q9UMS6 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.27
SYNPO2Q9UMS6 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SYNPO2Q9UMS6 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SYNPO2Q9UMS6 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SYNPO2Q9UMS6 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
SYNPO2Q9UMS6 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SYNPO2Q9UMS6 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SYNPO2Q9UMS6 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.27
SYNPO2Q9UMS6 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SYNPO2Q9UMS6 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 MARK2P16-201ENST00000605714 1723 ntBASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms