Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 AL136172.1-201ENST00000598590 1394 ntBASIC13.92□□□□□ -0.18
CTSFQ9UBX1 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CTSFQ9UBX1 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.92□□□□□ -0.18
CTSFQ9UBX1 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CTSFQ9UBX1 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CTSFQ9UBX1 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CTSFQ9UBX1 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.92□□□□□ -0.18
CTSFQ9UBX1 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CTSFQ9UBX1 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CTSFQ9UBX1 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 AL161772.1-201ENST00000610494 4412 ntBASIC13.91□□□□□ -0.18
CTSFQ9UBX1 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 REEP1-202ENST00000453231 940 ntTSL 2 BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 RPL18P13-201ENST00000478088 569 ntBASIC13.91□□□□□ -0.18
CTSFQ9UBX1 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 AC005324.6-201ENST00000587972 613 ntBASIC13.91□□□□□ -0.18
CTSFQ9UBX1 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 NDUFV2P1-201ENST00000596415 907 ntBASIC13.91□□□□□ -0.18
CTSFQ9UBX1 MIR6720-201ENST00000611664 98 ntBASIC13.91□□□□□ -0.18
CTSFQ9UBX1 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.91□□□□□ -0.18
CTSFQ9UBX1 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.91□□□□□ -0.18
CTSFQ9UBX1 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTSFQ9UBX1 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.9□□□□□ -0.18
CTSFQ9UBX1 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTSFQ9UBX1 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CTSFQ9UBX1 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTSFQ9UBX1 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTSFQ9UBX1 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.9□□□□□ -0.18
CTSFQ9UBX1 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTSFQ9UBX1 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTSFQ9UBX1 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.9□□□□□ -0.18
CTSFQ9UBX1 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CTSFQ9UBX1 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.9□□□□□ -0.18
CTSFQ9UBX1 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.9□□□□□ -0.18
CTSFQ9UBX1 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CTSFQ9UBX1 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTSFQ9UBX1 NPPA-201ENST00000376476 728 ntTSL 3 BASIC13.9□□□□□ -0.18
CTSFQ9UBX1 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CTSFQ9UBX1 IGHJ2P-201ENST00000454480 60 ntBASIC13.9□□□□□ -0.18
CTSFQ9UBX1 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.9□□□□□ -0.18
CTSFQ9UBX1 TPI1-206ENST00000488464 791 ntTSL 5 BASIC13.9□□□□□ -0.18
CTSFQ9UBX1 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms