Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 AC004945.1-201ENST00000416738 983 ntBASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 AC005237.2-201ENST00000434368 219 ntBASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 PIN1-206ENST00000587625 878 ntTSL 2 BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 RN7SL828P-201ENST00000607615 303 ntBASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 AL133215.2-201ENST00000609242 977 ntBASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 AL035456.1-201ENST00000456064 1369 ntBASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SND1-IT1Q9HBX3 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
SND1-IT1Q9HBX3 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
SND1-IT1Q9HBX3 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
SND1-IT1Q9HBX3 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
SND1-IT1Q9HBX3 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
SND1-IT1Q9HBX3 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC9.96□□□□□ -0.81
SND1-IT1Q9HBX3 Z82170.1-201ENST00000625081 3192 ntBASIC9.96□□□□□ -0.81
SND1-IT1Q9HBX3 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
SND1-IT1Q9HBX3 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC9.96□□□□□ -0.81
SND1-IT1Q9HBX3 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.81
SND1-IT1Q9HBX3 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
SND1-IT1Q9HBX3 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
SND1-IT1Q9HBX3 AC090505.1-201ENST00000430515 1834 ntBASIC9.96□□□□□ -0.81
SND1-IT1Q9HBX3 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
SND1-IT1Q9HBX3 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
SND1-IT1Q9HBX3 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
SND1-IT1Q9HBX3 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
SND1-IT1Q9HBX3 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
SND1-IT1Q9HBX3 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
SND1-IT1Q9HBX3 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
SND1-IT1Q9HBX3 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC9.96□□□□□ -0.81
SND1-IT1Q9HBX3 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
SND1-IT1Q9HBX3 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.81
SND1-IT1Q9HBX3 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.81
SND1-IT1Q9HBX3 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC9.96□□□□□ -0.81
SND1-IT1Q9HBX3 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 CD81-202ENST00000381036 880 ntTSL 3 BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 KRT18P32-201ENST00000424695 1287 ntBASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 KRT18P64-201ENST00000434946 1219 ntBASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 TPM4P1-201ENST00000436100 807 ntBASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 KRT18P43-201ENST00000469825 1281 ntBASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC9.96□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms