Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J3Q9H1A7 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 AL391825.1-201ENST00000457671 1364 ntBASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 RNU1-114P-201ENST00000365297 166 ntBASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 ACTBP8-201ENST00000403258 1108 ntBASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 SPDYE22P-201ENST00000582158 798 ntBASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 AC004790.1-201ENST00000612686 536 ntBASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 AC009118.2-201ENST00000613275 655 ntBASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 AC089987.1-201ENST00000551654 2209 ntBASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
POLR2J3Q9H1A7 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
POLR2J3Q9H1A7 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
POLR2J3Q9H1A7 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.72□□□□□ -0.21
POLR2J3Q9H1A7 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.72□□□□□ -0.21
POLR2J3Q9H1A7 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.72□□□□□ -0.21
POLR2J3Q9H1A7 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
POLR2J3Q9H1A7 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
POLR2J3Q9H1A7 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
POLR2J3Q9H1A7 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
POLR2J3Q9H1A7 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
POLR2J3Q9H1A7 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.72□□□□□ -0.21
POLR2J3Q9H1A7 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
POLR2J3Q9H1A7 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
POLR2J3Q9H1A7 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.72□□□□□ -0.21
POLR2J3Q9H1A7 ACKR1-201ENST00000368121 1240 ntBASIC13.72□□□□□ -0.21
POLR2J3Q9H1A7 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.72□□□□□ -0.21
POLR2J3Q9H1A7 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
POLR2J3Q9H1A7 KLF2P2-201ENST00000416807 1039 ntBASIC13.72□□□□□ -0.21
POLR2J3Q9H1A7 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.72□□□□□ -0.21
POLR2J3Q9H1A7 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.72□□□□□ -0.21
POLR2J3Q9H1A7 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.72□□□□□ -0.21
POLR2J3Q9H1A7 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.72□□□□□ -0.21
POLR2J3Q9H1A7 DFFBP1-201ENST00000433250 979 ntBASIC13.72□□□□□ -0.21
POLR2J3Q9H1A7 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
POLR2J3Q9H1A7 AC026434.2-201ENST00000506094 1078 ntBASIC13.72□□□□□ -0.21
POLR2J3Q9H1A7 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
POLR2J3Q9H1A7 AP001582.1-201ENST00000525856 295 ntBASIC13.72□□□□□ -0.21
POLR2J3Q9H1A7 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.72□□□□□ -0.21
POLR2J3Q9H1A7 ENPP7P5-201ENST00000541031 1031 ntBASIC13.72□□□□□ -0.21
POLR2J3Q9H1A7 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.72□□□□□ -0.21
POLR2J3Q9H1A7 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.72□□□□□ -0.21
POLR2J3Q9H1A7 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.72□□□□□ -0.21
POLR2J3Q9H1A7 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.72□□□□□ -0.21
POLR2J3Q9H1A7 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
POLR2J3Q9H1A7 AC093512.1-201ENST00000617969 520 ntBASIC13.72□□□□□ -0.21
POLR2J3Q9H1A7 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
POLR2J3Q9H1A7 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms