Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 AL137784.3-201ENST00000623858 2288 ntBASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 AC022494.1-201ENST00000466044 728 ntBASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 AC119751.2-201ENST00000504529 210 ntBASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 MIR6775-201ENST00000617557 69 ntBASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXP3Q9BZS1 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 KRT223P-202ENST00000449164 1292 ntBASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 AC036164.1-201ENST00000570544 333 ntBASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 AC093813.1-201ENST00000605066 256 ntBASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 AC107373.2-201ENST00000607735 490 ntBASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 RN7SL832P-201ENST00000607781 1756 ntBASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 AC133552.6-201ENST00000613406 534 ntBASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 AC126335.2-201ENST00000623362 4637 ntBASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXP3Q9BZS1 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms