Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTFDC1Q9BY42 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RTFDC1Q9BY42 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC17.64■□□□□ 0.42
RTFDC1Q9BY42 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 IDS-203ENST00000428056 1213 ntTSL 2 BASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 AQP7P5-201ENST00000428759 1049 ntBASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 AQP7P4-201ENST00000447083 1042 ntBASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 AQP7P2-201ENST00000453967 1041 ntBASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 OR5BD1P-201ENST00000532527 817 ntBASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 AQP7P3-201ENST00000624547 1041 ntBASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RTFDC1Q9BY42 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 RN7SKP109-201ENST00000410592 316 ntBASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 CELP-201ENST00000411440 1249 ntTSL 5 BASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 RN7SL357P-201ENST00000581065 298 ntBASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 SIGLEC22P-201ENST00000599104 714 ntBASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 AC002044.2-201ENST00000624910 970 ntBASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.63■□□□□ 0.41
RTFDC1Q9BY42 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
RTFDC1Q9BY42 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.62■□□□□ 0.41
RTFDC1Q9BY42 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTFDC1Q9BY42 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTFDC1Q9BY42 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC17.62■□□□□ 0.41
RTFDC1Q9BY42 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RTFDC1Q9BY42 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTFDC1Q9BY42 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTFDC1Q9BY42 NHP2-202ENST00000314397 599 ntTSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms