Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 AC064801.2-201ENST00000625052 1303 ntBASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 ARSEP1-201ENST00000420443 635 ntBASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 CNN2P8-201ENST00000421872 913 ntBASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 CICP12-201ENST00000455801 843 ntBASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 FTH1P14-201ENST00000482930 551 ntBASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 RNA5SP486-201ENST00000515961 83 ntBASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 AP005018.1-201ENST00000525475 301 ntBASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 AC104506.1-201ENST00000609247 429 ntBASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
RSPO3Q9BXY4 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 TPM3P8-201ENST00000330554 643 ntBASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 IGHV3-72-202ENST00000621503 303 ntBASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 AL137784.3-201ENST00000623858 2288 ntBASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RSPO3Q9BXY4 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
RSPO3Q9BXY4 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms