Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PKP4Q99569 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
PKP4Q99569 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.41□□□□□ -0.1
PKP4Q99569 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PKP4Q99569 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
PKP4Q99569 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
PKP4Q99569 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PKP4Q99569 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PKP4Q99569 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
PKP4Q99569 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PKP4Q99569 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PKP4Q99569 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PKP4Q99569 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PKP4Q99569 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.41□□□□□ -0.1
PKP4Q99569 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PKP4Q99569 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
PKP4Q99569 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PKP4Q99569 AL136309.1-201ENST00000403917 691 ntBASIC14.41□□□□□ -0.1
PKP4Q99569 AC099336.1-201ENST00000417053 1171 ntBASIC14.41□□□□□ -0.1
PKP4Q99569 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.41□□□□□ -0.1
PKP4Q99569 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
PKP4Q99569 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.41□□□□□ -0.1
PKP4Q99569 CNN2P10-201ENST00000443067 918 ntBASIC14.41□□□□□ -0.1
PKP4Q99569 AC119751.2-201ENST00000504529 210 ntBASIC14.41□□□□□ -0.1
PKP4Q99569 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.41□□□□□ -0.1
PKP4Q99569 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.41□□□□□ -0.1
PKP4Q99569 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.41□□□□□ -0.1
PKP4Q99569 AC023310.1-201ENST00000554836 735 ntBASIC14.41□□□□□ -0.1
PKP4Q99569 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PKP4Q99569 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.41□□□□□ -0.1
PKP4Q99569 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.41□□□□□ -0.1
PKP4Q99569 ZACNP1-201ENST00000612259 710 ntBASIC14.41□□□□□ -0.1
PKP4Q99569 AP001002.3-201ENST00000623482 206 ntBASIC14.41□□□□□ -0.1
PKP4Q99569 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PKP4Q99569 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
PKP4Q99569 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PKP4Q99569 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PKP4Q99569 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PKP4Q99569 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PKP4Q99569 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PKP4Q99569 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PKP4Q99569 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.41□□□□□ -0.1
PKP4Q99569 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.41□□□□□ -0.1
PKP4Q99569 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PKP4Q99569 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PKP4Q99569 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PKP4Q99569 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PKP4Q99569 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PKP4Q99569 BX640514.1-201ENST00000583223 1918 ntBASIC14.41□□□□□ -0.1
PKP4Q99569 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PKP4Q99569 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PKP4Q99569 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.4□□□□□ -0.1
PKP4Q99569 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PKP4Q99569 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PKP4Q99569 ST20-AS1-201ENST00000560255 4223 ntBASIC14.4□□□□□ -0.1
PKP4Q99569 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PKP4Q99569 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.4□□□□□ -0.1
PKP4Q99569 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PKP4Q99569 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
PKP4Q99569 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PKP4Q99569 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
PKP4Q99569 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.4□□□□□ -0.1
PKP4Q99569 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PKP4Q99569 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PKP4Q99569 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.4□□□□□ -0.1
PKP4Q99569 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PKP4Q99569 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PKP4Q99569 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PKP4Q99569 HLA-V-201ENST00000429037 534 ntBASIC14.4□□□□□ -0.1
PKP4Q99569 PUDPP3-201ENST00000445368 636 ntBASIC14.4□□□□□ -0.1
PKP4Q99569 CHMP1AP1-201ENST00000445563 662 ntBASIC14.4□□□□□ -0.1
PKP4Q99569 CSF2RBP1-201ENST00000447905 391 ntBASIC14.4□□□□□ -0.1
PKP4Q99569 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.4□□□□□ -0.1
PKP4Q99569 IGHV3-71-201ENST00000523324 359 ntBASIC14.4□□□□□ -0.1
PKP4Q99569 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.4□□□□□ -0.1
PKP4Q99569 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.4□□□□□ -0.1
PKP4Q99569 AP006547.1-201ENST00000563435 692 ntBASIC14.4□□□□□ -0.1
PKP4Q99569 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.4□□□□□ -0.1
PKP4Q99569 MIR4259-201ENST00000584466 101 ntBASIC14.4□□□□□ -0.1
PKP4Q99569 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.4□□□□□ -0.1
PKP4Q99569 AC017083.2-201ENST00000608069 979 ntBASIC14.4□□□□□ -0.1
PKP4Q99569 AL358472.3-201ENST00000608147 415 ntBASIC14.4□□□□□ -0.1
PKP4Q99569 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.4□□□□□ -0.1
PKP4Q99569 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PKP4Q99569 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
PKP4Q99569 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.4□□□□□ -0.1
PKP4Q99569 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PKP4Q99569 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PKP4Q99569 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PKP4Q99569 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PKP4Q99569 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PKP4Q99569 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PKP4Q99569 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.4□□□□□ -0.1
PKP4Q99569 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PKP4Q99569 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PKP4Q99569 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PKP4Q99569 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PKP4Q99569 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PKP4Q99569 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PKP4Q99569 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms