Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.27□□□□□ -0.45
CSMD1Q96PZ7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CSMD1Q96PZ7 AC117489.1-201ENST00000625169 3217 ntBASIC12.27□□□□□ -0.45
CSMD1Q96PZ7 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CSMD1Q96PZ7 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
CSMD1Q96PZ7 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CSMD1Q96PZ7 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CSMD1Q96PZ7 AC003102.2-201ENST00000589195 1469 ntBASIC12.27□□□□□ -0.45
CSMD1Q96PZ7 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CSMD1Q96PZ7 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CSMD1Q96PZ7 WASH3P-207ENST00000560956 1394 ntBASIC12.27□□□□□ -0.45
CSMD1Q96PZ7 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CSMD1Q96PZ7 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CSMD1Q96PZ7 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CSMD1Q96PZ7 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
CSMD1Q96PZ7 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
CSMD1Q96PZ7 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.27□□□□□ -0.45
CSMD1Q96PZ7 ALG3P1-201ENST00000508806 1114 ntBASIC12.27□□□□□ -0.45
CSMD1Q96PZ7 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC12.27□□□□□ -0.45
CSMD1Q96PZ7 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC12.27□□□□□ -0.45
CSMD1Q96PZ7 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 AC006372.4-201ENST00000624122 1543 ntBASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 CASP3-205ENST00000517513 964 ntTSL 5 BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 AC067931.2-201ENST00000623655 2003 ntBASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 GUSBP10-201ENST00000417412 665 ntBASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 AHCYP4-201ENST00000419201 1315 ntBASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC12.26□□□□□ -0.45
CSMD1Q96PZ7 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 GPX3-202ENST00000517973 612 ntTSL 3 BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 BMF-206ENST00000558774 671 ntTSL 3 BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 AC026412.1-206ENST00000502273 206 ntBASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms