Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 CROT-203ENST00000419147 2959 ntTSL 2 BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 AC090643.2-201ENST00000623442 2029 ntBASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 AC236430.1-201ENST00000402231 743 ntBASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 KLF2P2-201ENST00000416807 1039 ntBASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 AC055876.3-201ENST00000431496 288 ntBASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 AL359711.2-201ENST00000563105 872 ntBASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 AC120045.2-201ENST00000567334 178 ntBASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 AC084346.2-201ENST00000607097 949 ntBASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 AC138649.4-201ENST00000612222 287 ntBASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 BX539320.1-201ENST00000623759 877 ntBASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 MIR497HG-202ENST00000572453 3838 ntBASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 TCAF1P1-201ENST00000414990 2232 ntBASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 AC004241.5-201ENST00000623870 2448 ntBASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHAMP1Q96JM3 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
CHAMP1Q96JM3 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
CHAMP1Q96JM3 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHAMP1Q96JM3 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC17.15■□□□□ 0.34
CHAMP1Q96JM3 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC17.15■□□□□ 0.34
CHAMP1Q96JM3 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC17.15■□□□□ 0.34
CHAMP1Q96JM3 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CHAMP1Q96JM3 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CHAMP1Q96JM3 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHAMP1Q96JM3 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHAMP1Q96JM3 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC17.15■□□□□ 0.34
CHAMP1Q96JM3 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CHAMP1Q96JM3 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHAMP1Q96JM3 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHAMP1Q96JM3 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CHAMP1Q96JM3 RN7SKP230-201ENST00000365642 335 ntBASIC17.15■□□□□ 0.34
CHAMP1Q96JM3 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CHAMP1Q96JM3 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHAMP1Q96JM3 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.15■□□□□ 0.34
CHAMP1Q96JM3 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.15■□□□□ 0.34
CHAMP1Q96JM3 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.15■□□□□ 0.34
CHAMP1Q96JM3 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHAMP1Q96JM3 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHAMP1Q96JM3 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHAMP1Q96JM3 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC17.15■□□□□ 0.34
CHAMP1Q96JM3 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.15■□□□□ 0.34
CHAMP1Q96JM3 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.15■□□□□ 0.34
CHAMP1Q96JM3 AC124283.3-201ENST00000570869 594 ntBASIC17.15■□□□□ 0.34
CHAMP1Q96JM3 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.15■□□□□ 0.34
CHAMP1Q96JM3 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHAMP1Q96JM3 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CHAMP1Q96JM3 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CHAMP1Q96JM3 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC17.15■□□□□ 0.34
CHAMP1Q96JM3 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHAMP1Q96JM3 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC17.15■□□□□ 0.34
CHAMP1Q96JM3 INTS4P2-202ENST00000614726 2019 ntBASIC17.14■□□□□ 0.34
CHAMP1Q96JM3 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CHAMP1Q96JM3 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHAMP1Q96JM3 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHAMP1Q96JM3 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHAMP1Q96JM3 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.14■□□□□ 0.33
CHAMP1Q96JM3 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.14■□□□□ 0.33
CHAMP1Q96JM3 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms