Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 AC004945.1-201ENST00000416738 983 ntBASIC12.89□□□□□ -0.35
CCDC107Q8WV48 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 KRT18P43-201ENST00000469825 1281 ntBASIC12.89□□□□□ -0.35
CCDC107Q8WV48 TMEM198B-204ENST00000484016 896 ntBASIC12.89□□□□□ -0.35
CCDC107Q8WV48 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 AC140878.1-201ENST00000565277 250 ntBASIC12.89□□□□□ -0.35
CCDC107Q8WV48 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 WDR88-203ENST00000592765 651 ntTSL 5 BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 AC105206.1-202ENST00000314927 2368 ntBASIC12.89□□□□□ -0.35
CCDC107Q8WV48 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 AC005562.1-201ENST00000583030 3219 ntBASIC12.89□□□□□ -0.35
CCDC107Q8WV48 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.89□□□□□ -0.35
CCDC107Q8WV48 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 MIR943-201ENST00000401286 94 ntBASIC12.88□□□□□ -0.35
CCDC107Q8WV48 AC092580.3-201ENST00000430932 139 ntBASIC12.88□□□□□ -0.35
CCDC107Q8WV48 AC097493.3-201ENST00000509725 367 ntBASIC12.88□□□□□ -0.35
CCDC107Q8WV48 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 TIMM17BP1-201ENST00000545713 516 ntBASIC12.88□□□□□ -0.35
CCDC107Q8WV48 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 LSM12-202ENST00000585388 942 ntTSL 3 BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.88□□□□□ -0.35
CCDC107Q8WV48 PID1-202ENST00000392054 2745 ntTSL 2 BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC107Q8WV48 AC087499.5-201ENST00000452760 1342 ntBASIC12.88□□□□□ -0.35
CCDC107Q8WV48 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms