Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC15.86■□□□□ 0.13
BEST2Q8NFU1 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC15.86■□□□□ 0.13
BEST2Q8NFU1 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
BEST2Q8NFU1 AC005962.1-201ENST00000584100 773 ntBASIC15.86■□□□□ 0.13
BEST2Q8NFU1 AC138649.2-201ENST00000615886 705 ntBASIC15.86■□□□□ 0.13
BEST2Q8NFU1 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.86■□□□□ 0.13
BEST2Q8NFU1 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST2Q8NFU1 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.86■□□□□ 0.13
BEST2Q8NFU1 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
BEST2Q8NFU1 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
BEST2Q8NFU1 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST2Q8NFU1 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
BEST2Q8NFU1 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.86■□□□□ 0.13
BEST2Q8NFU1 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST2Q8NFU1 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST2Q8NFU1 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
BEST2Q8NFU1 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
BEST2Q8NFU1 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST2Q8NFU1 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.86■□□□□ 0.13
BEST2Q8NFU1 AC009093.10-201ENST00000641956 1442 ntBASIC15.85■□□□□ 0.13
BEST2Q8NFU1 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
BEST2Q8NFU1 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
BEST2Q8NFU1 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
BEST2Q8NFU1 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
BEST2Q8NFU1 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.85■□□□□ 0.13
BEST2Q8NFU1 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
BEST2Q8NFU1 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
BEST2Q8NFU1 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
BEST2Q8NFU1 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
BEST2Q8NFU1 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
BEST2Q8NFU1 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
BEST2Q8NFU1 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
BEST2Q8NFU1 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.85■□□□□ 0.13
BEST2Q8NFU1 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
BEST2Q8NFU1 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.85■□□□□ 0.13
BEST2Q8NFU1 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
BEST2Q8NFU1 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.85■□□□□ 0.13
BEST2Q8NFU1 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.85■□□□□ 0.13
BEST2Q8NFU1 AL645933.1-201ENST00000440087 609 ntBASIC15.85■□□□□ 0.13
BEST2Q8NFU1 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.85■□□□□ 0.13
BEST2Q8NFU1 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
BEST2Q8NFU1 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.85■□□□□ 0.13
BEST2Q8NFU1 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC15.85■□□□□ 0.13
BEST2Q8NFU1 AC013355.1-201ENST00000562625 723 ntBASIC15.85■□□□□ 0.13
BEST2Q8NFU1 AC008805.1-201ENST00000590892 364 ntBASIC15.85■□□□□ 0.13
BEST2Q8NFU1 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC15.85■□□□□ 0.13
BEST2Q8NFU1 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.85■□□□□ 0.13
BEST2Q8NFU1 AP000346.4-201ENST00000614827 381 ntBASIC15.85■□□□□ 0.13
BEST2Q8NFU1 AC068587.8-201ENST00000641239 219 ntBASIC15.85■□□□□ 0.13
BEST2Q8NFU1 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
BEST2Q8NFU1 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
BEST2Q8NFU1 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
BEST2Q8NFU1 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
BEST2Q8NFU1 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
BEST2Q8NFU1 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.85■□□□□ 0.13
BEST2Q8NFU1 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
BEST2Q8NFU1 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
BEST2Q8NFU1 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
BEST2Q8NFU1 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
BEST2Q8NFU1 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.85■□□□□ 0.13
BEST2Q8NFU1 KRT8P28-201ENST00000433288 1390 ntBASIC15.85■□□□□ 0.13
BEST2Q8NFU1 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
BEST2Q8NFU1 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
BEST2Q8NFU1 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
BEST2Q8NFU1 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST2Q8NFU1 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
BEST2Q8NFU1 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.84■□□□□ 0.13
BEST2Q8NFU1 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
BEST2Q8NFU1 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
BEST2Q8NFU1 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
BEST2Q8NFU1 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST2Q8NFU1 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
BEST2Q8NFU1 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST2Q8NFU1 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST2Q8NFU1 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST2Q8NFU1 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST2Q8NFU1 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST2Q8NFU1 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST2Q8NFU1 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST2Q8NFU1 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.84■□□□□ 0.13
BEST2Q8NFU1 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
BEST2Q8NFU1 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST2Q8NFU1 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST2Q8NFU1 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST2Q8NFU1 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.84■□□□□ 0.13
BEST2Q8NFU1 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.84■□□□□ 0.13
BEST2Q8NFU1 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.84■□□□□ 0.13
BEST2Q8NFU1 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST2Q8NFU1 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST2Q8NFU1 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
BEST2Q8NFU1 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST2Q8NFU1 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC15.84■□□□□ 0.13
BEST2Q8NFU1 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
BEST2Q8NFU1 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
BEST2Q8NFU1 FNTAP2-201ENST00000430308 634 ntBASIC15.84■□□□□ 0.13
BEST2Q8NFU1 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.84■□□□□ 0.13
BEST2Q8NFU1 AC104073.2-201ENST00000453737 312 ntBASIC15.84■□□□□ 0.13
BEST2Q8NFU1 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.84■□□□□ 0.13
BEST2Q8NFU1 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.84■□□□□ 0.13
BEST2Q8NFU1 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms