Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
ZNF248Q8NDW4 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 AP000593.2-201ENST00000542775 1433 ntBASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 AL627231.1-201ENST00000394467 1125 ntBASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 HPGD-203ENST00000422112 805 ntTSL 2 BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 AC009955.4-201ENST00000597192 544 ntBASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 WT1-AS_6.1-201ENST00000614919 121 ntBASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 PPT1-215ENST00000641471 2368 ntBASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF248Q8NDW4 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.15□□□□□ -0.14
ZNF248Q8NDW4 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
ZNF248Q8NDW4 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF248Q8NDW4 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.15□□□□□ -0.14
ZNF248Q8NDW4 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
ZNF248Q8NDW4 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
ZNF248Q8NDW4 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF248Q8NDW4 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
ZNF248Q8NDW4 TP73-201ENST00000346387 4854 ntTSL 5 BASIC14.15□□□□□ -0.14
ZNF248Q8NDW4 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF248Q8NDW4 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF248Q8NDW4 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF248Q8NDW4 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF248Q8NDW4 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF248Q8NDW4 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
ZNF248Q8NDW4 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.15□□□□□ -0.14
ZNF248Q8NDW4 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.15□□□□□ -0.14
ZNF248Q8NDW4 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF248Q8NDW4 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
ZNF248Q8NDW4 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
ZNF248Q8NDW4 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.15□□□□□ -0.14
ZNF248Q8NDW4 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.15□□□□□ -0.14
ZNF248Q8NDW4 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF248Q8NDW4 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.15□□□□□ -0.14
ZNF248Q8NDW4 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC14.15□□□□□ -0.14
ZNF248Q8NDW4 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF248Q8NDW4 AC079112.1-201ENST00000454972 939 ntBASIC14.15□□□□□ -0.14
ZNF248Q8NDW4 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.15□□□□□ -0.14
ZNF248Q8NDW4 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC14.15□□□□□ -0.14
ZNF248Q8NDW4 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.15□□□□□ -0.14
ZNF248Q8NDW4 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms