Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RFX6Q8HWS3 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RFX6Q8HWS3 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
RFX6Q8HWS3 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RFX6Q8HWS3 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
RFX6Q8HWS3 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
RFX6Q8HWS3 RN7SKP230-201ENST00000365642 335 ntBASIC15.42■□□□□ 0.06
RFX6Q8HWS3 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RFX6Q8HWS3 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.42■□□□□ 0.06
RFX6Q8HWS3 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.42■□□□□ 0.06
RFX6Q8HWS3 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RFX6Q8HWS3 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
RFX6Q8HWS3 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
RFX6Q8HWS3 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.42■□□□□ 0.06
RFX6Q8HWS3 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.42■□□□□ 0.06
RFX6Q8HWS3 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
RFX6Q8HWS3 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RFX6Q8HWS3 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.42■□□□□ 0.06
RFX6Q8HWS3 AC131206.1-201ENST00000538078 1211 ntBASIC15.42■□□□□ 0.06
RFX6Q8HWS3 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.42■□□□□ 0.06
RFX6Q8HWS3 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.42■□□□□ 0.06
RFX6Q8HWS3 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.42■□□□□ 0.06
RFX6Q8HWS3 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.42■□□□□ 0.06
RFX6Q8HWS3 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.42■□□□□ 0.06
RFX6Q8HWS3 ENPP7P14-201ENST00000621765 1040 ntBASIC15.42■□□□□ 0.06
RFX6Q8HWS3 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
RFX6Q8HWS3 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RFX6Q8HWS3 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.42■□□□□ 0.06
RFX6Q8HWS3 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC15.42■□□□□ 0.06
RFX6Q8HWS3 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RFX6Q8HWS3 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
RFX6Q8HWS3 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RFX6Q8HWS3 AC015688.4-201ENST00000580780 1647 ntBASIC15.42■□□□□ 0.06
RFX6Q8HWS3 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC15.42■□□□□ 0.06
RFX6Q8HWS3 AC136759.1-202ENST00000530858 2194 ntBASIC15.42■□□□□ 0.06
RFX6Q8HWS3 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RFX6Q8HWS3 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RFX6Q8HWS3 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RFX6Q8HWS3 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.42■□□□□ 0.06
RFX6Q8HWS3 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
RFX6Q8HWS3 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RFX6Q8HWS3 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFX6Q8HWS3 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.41■□□□□ 0.06
RFX6Q8HWS3 AC006504.5-208ENST00000588784 2401 ntBASIC15.41■□□□□ 0.06
RFX6Q8HWS3 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFX6Q8HWS3 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFX6Q8HWS3 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFX6Q8HWS3 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFX6Q8HWS3 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFX6Q8HWS3 POM121L8P-201ENST00000417732 1281 ntBASIC15.41■□□□□ 0.06
RFX6Q8HWS3 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.41■□□□□ 0.06
RFX6Q8HWS3 POM121L9P-203ENST00000441984 1285 ntBASIC15.41■□□□□ 0.06
RFX6Q8HWS3 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.41■□□□□ 0.06
RFX6Q8HWS3 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.41■□□□□ 0.06
RFX6Q8HWS3 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RFX6Q8HWS3 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFX6Q8HWS3 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RFX6Q8HWS3 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.41■□□□□ 0.06
RFX6Q8HWS3 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.41■□□□□ 0.06
RFX6Q8HWS3 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.41■□□□□ 0.06
RFX6Q8HWS3 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.41■□□□□ 0.06
RFX6Q8HWS3 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RFX6Q8HWS3 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.41■□□□□ 0.06
RFX6Q8HWS3 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.41■□□□□ 0.06
RFX6Q8HWS3 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.41■□□□□ 0.06
RFX6Q8HWS3 RPSAP52-203ENST00000622976 1023 ntBASIC15.41■□□□□ 0.06
RFX6Q8HWS3 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFX6Q8HWS3 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFX6Q8HWS3 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFX6Q8HWS3 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.41■□□□□ 0.06
RFX6Q8HWS3 AC020910.5-201ENST00000623668 1865 ntBASIC15.41■□□□□ 0.06
RFX6Q8HWS3 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.41■□□□□ 0.06
RFX6Q8HWS3 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RFX6Q8HWS3 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RFX6Q8HWS3 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RFX6Q8HWS3 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFX6Q8HWS3 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.41■□□□□ 0.06
RFX6Q8HWS3 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFX6Q8HWS3 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RFX6Q8HWS3 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFX6Q8HWS3 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RFX6Q8HWS3 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFX6Q8HWS3 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFX6Q8HWS3 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.41■□□□□ 0.06
RFX6Q8HWS3 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFX6Q8HWS3 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms