Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRC28Q86X40 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.24□□□□□ -0.29
LRRC28Q86X40 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
LRRC28Q86X40 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LRRC28Q86X40 AC005562.1-201ENST00000583030 3219 ntBASIC13.24□□□□□ -0.29
LRRC28Q86X40 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LRRC28Q86X40 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRC28Q86X40 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.24□□□□□ -0.29
LRRC28Q86X40 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
LRRC28Q86X40 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRC28Q86X40 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
LRRC28Q86X40 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRC28Q86X40 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRC28Q86X40 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LRRC28Q86X40 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRC28Q86X40 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LRRC28Q86X40 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.24□□□□□ -0.29
LRRC28Q86X40 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
LRRC28Q86X40 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.24□□□□□ -0.29
LRRC28Q86X40 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.24□□□□□ -0.29
LRRC28Q86X40 SLC7A15P-201ENST00000424028 1363 ntBASIC13.24□□□□□ -0.29
LRRC28Q86X40 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
LRRC28Q86X40 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LRRC28Q86X40 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
LRRC28Q86X40 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRC28Q86X40 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
LRRC28Q86X40 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRC28Q86X40 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
LRRC28Q86X40 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRC28Q86X40 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.24□□□□□ -0.29
LRRC28Q86X40 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.24□□□□□ -0.29
LRRC28Q86X40 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.24□□□□□ -0.29
LRRC28Q86X40 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.24□□□□□ -0.29
LRRC28Q86X40 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.24□□□□□ -0.29
LRRC28Q86X40 AL589987.1-201ENST00000453380 819 ntBASIC13.24□□□□□ -0.29
LRRC28Q86X40 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.24□□□□□ -0.29
LRRC28Q86X40 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LRRC28Q86X40 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.24□□□□□ -0.29
LRRC28Q86X40 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.24□□□□□ -0.29
LRRC28Q86X40 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.24□□□□□ -0.29
LRRC28Q86X40 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.24□□□□□ -0.29
LRRC28Q86X40 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.24□□□□□ -0.29
LRRC28Q86X40 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.24□□□□□ -0.29
LRRC28Q86X40 AC023310.3-201ENST00000557027 670 ntBASIC13.24□□□□□ -0.29
LRRC28Q86X40 AC100756.1-201ENST00000562736 682 ntBASIC13.24□□□□□ -0.29
LRRC28Q86X40 AC138749.3-201ENST00000567691 622 ntBASIC13.24□□□□□ -0.29
LRRC28Q86X40 TP53TG3HP-202ENST00000569755 579 ntBASIC13.24□□□□□ -0.29
LRRC28Q86X40 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.24□□□□□ -0.29
LRRC28Q86X40 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.24□□□□□ -0.29
LRRC28Q86X40 LINC01115-203ENST00000606068 577 ntBASIC13.24□□□□□ -0.29
LRRC28Q86X40 AC116165.1-201ENST00000611806 668 ntBASIC13.24□□□□□ -0.29
LRRC28Q86X40 AC004790.1-201ENST00000612686 536 ntBASIC13.24□□□□□ -0.29
LRRC28Q86X40 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.24□□□□□ -0.29
LRRC28Q86X40 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LRRC28Q86X40 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRC28Q86X40 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
LRRC28Q86X40 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRC28Q86X40 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRC28Q86X40 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
LRRC28Q86X40 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRC28Q86X40 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRC28Q86X40 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LRRC28Q86X40 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRC28Q86X40 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LRRC28Q86X40 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
LRRC28Q86X40 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.24□□□□□ -0.29
LRRC28Q86X40 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRC28Q86X40 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.24□□□□□ -0.29
LRRC28Q86X40 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.24□□□□□ -0.29
LRRC28Q86X40 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRC28Q86X40 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRC28Q86X40 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
LRRC28Q86X40 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRC28Q86X40 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.24□□□□□ -0.29
LRRC28Q86X40 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.24□□□□□ -0.29
LRRC28Q86X40 TCAM1P-207ENST00000485295 1537 ntBASIC13.23□□□□□ -0.29
LRRC28Q86X40 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
LRRC28Q86X40 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC28Q86X40 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
LRRC28Q86X40 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
LRRC28Q86X40 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC28Q86X40 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC28Q86X40 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC28Q86X40 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC28Q86X40 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC28Q86X40 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.23□□□□□ -0.29
LRRC28Q86X40 LILRP1-201ENST00000444199 1370 ntBASIC13.23□□□□□ -0.29
LRRC28Q86X40 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC28Q86X40 AC090505.1-201ENST00000430515 1834 ntBASIC13.23□□□□□ -0.29
LRRC28Q86X40 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC28Q86X40 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC28Q86X40 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC28Q86X40 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC28Q86X40 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC28Q86X40 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.23□□□□□ -0.29
LRRC28Q86X40 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
LRRC28Q86X40 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC28Q86X40 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
LRRC28Q86X40 AC074338.1-201ENST00000416825 156 ntBASIC13.23□□□□□ -0.29
LRRC28Q86X40 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms