Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 MBLAC2-202ENST00000514906 1936 ntBASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.27
NHLRC1Q6VVB1 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
NHLRC1Q6VVB1 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
NHLRC1Q6VVB1 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
NHLRC1Q6VVB1 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.33□□□□□ -0.27
NHLRC1Q6VVB1 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.33□□□□□ -0.27
NHLRC1Q6VVB1 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
NHLRC1Q6VVB1 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
NHLRC1Q6VVB1 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 AC007969.1-201ENST00000433675 447 ntBASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 COX20P2-201ENST00000452636 358 ntBASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 AC233724.13-201ENST00000598383 410 ntBASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 LINC02084-201ENST00000606069 1096 ntBASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 AC007326.2-201ENST00000624224 7579 ntBASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NHLRC1Q6VVB1 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 SALL4P5-201ENST00000419001 1760 ntBASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms