Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFX7Q2KHR2 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RFX7Q2KHR2 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFX7Q2KHR2 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFX7Q2KHR2 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RFX7Q2KHR2 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC17.69■□□□□ 0.42
RFX7Q2KHR2 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFX7Q2KHR2 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC17.69■□□□□ 0.42
RFX7Q2KHR2 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFX7Q2KHR2 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFX7Q2KHR2 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.69■□□□□ 0.42
RFX7Q2KHR2 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RFX7Q2KHR2 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
RFX7Q2KHR2 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC17.69■□□□□ 0.42
RFX7Q2KHR2 CMC1-204ENST00000423894 549 ntTSL 2 BASIC17.69■□□□□ 0.42
RFX7Q2KHR2 AL161932.2-201ENST00000435436 679 ntBASIC17.69■□□□□ 0.42
RFX7Q2KHR2 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC17.69■□□□□ 0.42
RFX7Q2KHR2 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RFX7Q2KHR2 AC116345.2-201ENST00000512837 523 ntBASIC17.69■□□□□ 0.42
RFX7Q2KHR2 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC17.69■□□□□ 0.42
RFX7Q2KHR2 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC17.69■□□□□ 0.42
RFX7Q2KHR2 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC17.69■□□□□ 0.42
RFX7Q2KHR2 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFX7Q2KHR2 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC17.69■□□□□ 0.42
RFX7Q2KHR2 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC17.69■□□□□ 0.42
RFX7Q2KHR2 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFX7Q2KHR2 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RFX7Q2KHR2 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC17.69■□□□□ 0.42
RFX7Q2KHR2 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFX7Q2KHR2 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFX7Q2KHR2 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFX7Q2KHR2 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC17.69■□□□□ 0.42
RFX7Q2KHR2 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFX7Q2KHR2 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RFX7Q2KHR2 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFX7Q2KHR2 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RFX7Q2KHR2 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.69■□□□□ 0.42
RFX7Q2KHR2 ADK-205ENST00000539909 1866 ntTSL 2 BASIC17.69■□□□□ 0.42
RFX7Q2KHR2 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFX7Q2KHR2 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
RFX7Q2KHR2 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
RFX7Q2KHR2 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFX7Q2KHR2 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFX7Q2KHR2 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RFX7Q2KHR2 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFX7Q2KHR2 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC17.68■□□□□ 0.42
RFX7Q2KHR2 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC17.68■□□□□ 0.42
RFX7Q2KHR2 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFX7Q2KHR2 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RFX7Q2KHR2 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC17.68■□□□□ 0.42
RFX7Q2KHR2 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RFX7Q2KHR2 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC17.68■□□□□ 0.42
RFX7Q2KHR2 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.68■□□□□ 0.42
RFX7Q2KHR2 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC17.68■□□□□ 0.42
RFX7Q2KHR2 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC17.68■□□□□ 0.42
RFX7Q2KHR2 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC17.68■□□□□ 0.42
RFX7Q2KHR2 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC17.68■□□□□ 0.42
RFX7Q2KHR2 RN7SL190P-201ENST00000582519 257 ntBASIC17.68■□□□□ 0.42
RFX7Q2KHR2 AL133499.1-201ENST00000596207 608 ntBASIC17.68■□□□□ 0.42
RFX7Q2KHR2 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
RFX7Q2KHR2 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC17.68■□□□□ 0.42
RFX7Q2KHR2 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RFX7Q2KHR2 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC17.68■□□□□ 0.42
RFX7Q2KHR2 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RFX7Q2KHR2 AC020910.6-201ENST00000623084 1459 ntBASIC17.68■□□□□ 0.42
RFX7Q2KHR2 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC17.68■□□□□ 0.42
RFX7Q2KHR2 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFX7Q2KHR2 GSN-209ENST00000449733 2702 ntTSL 2 BASIC17.68■□□□□ 0.42
RFX7Q2KHR2 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC17.68■□□□□ 0.42
RFX7Q2KHR2 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
RFX7Q2KHR2 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RFX7Q2KHR2 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC17.68■□□□□ 0.42
RFX7Q2KHR2 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RFX7Q2KHR2 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
RFX7Q2KHR2 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RFX7Q2KHR2 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFX7Q2KHR2 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RFX7Q2KHR2 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RFX7Q2KHR2 TMBIM7P-202ENST00000641474 1516 ntBASIC17.68■□□□□ 0.42
RFX7Q2KHR2 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.68■□□□□ 0.42
RFX7Q2KHR2 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RFX7Q2KHR2 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFX7Q2KHR2 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RFX7Q2KHR2 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC17.67■□□□□ 0.42
RFX7Q2KHR2 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RFX7Q2KHR2 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RFX7Q2KHR2 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC17.67■□□□□ 0.42
RFX7Q2KHR2 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RFX7Q2KHR2 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
RFX7Q2KHR2 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC17.67■□□□□ 0.42
RFX7Q2KHR2 AC078875.1-201ENST00000431907 724 ntBASIC17.67■□□□□ 0.42
RFX7Q2KHR2 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC17.67■□□□□ 0.42
RFX7Q2KHR2 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC17.67■□□□□ 0.42
RFX7Q2KHR2 SUPT4H1P2-201ENST00000501248 353 ntBASIC17.67■□□□□ 0.42
RFX7Q2KHR2 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC17.67■□□□□ 0.42
RFX7Q2KHR2 AC134698.3-201ENST00000523880 214 ntBASIC17.67■□□□□ 0.42
RFX7Q2KHR2 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC17.67■□□□□ 0.42
RFX7Q2KHR2 PAM16-211ENST00000575848 518 ntTSL 3 BASIC17.67■□□□□ 0.42
RFX7Q2KHR2 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RFX7Q2KHR2 AC005962.1-201ENST00000584100 773 ntBASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms