Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.28□□□□□ -0.12
PCDH1Q08174 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
PCDH1Q08174 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PCDH1Q08174 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.28□□□□□ -0.12
PCDH1Q08174 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PCDH1Q08174 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PCDH1Q08174 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.28□□□□□ -0.12
PCDH1Q08174 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.28□□□□□ -0.12
PCDH1Q08174 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.28□□□□□ -0.12
PCDH1Q08174 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
PCDH1Q08174 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
PCDH1Q08174 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
PCDH1Q08174 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDH1Q08174 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PCDH1Q08174 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.28□□□□□ -0.12
PCDH1Q08174 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
PCDH1Q08174 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.28□□□□□ -0.12
PCDH1Q08174 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.28□□□□□ -0.12
PCDH1Q08174 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.28□□□□□ -0.12
PCDH1Q08174 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.28□□□□□ -0.12
PCDH1Q08174 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.28□□□□□ -0.12
PCDH1Q08174 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.28□□□□□ -0.12
PCDH1Q08174 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.28□□□□□ -0.12
PCDH1Q08174 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
PCDH1Q08174 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.28□□□□□ -0.12
PCDH1Q08174 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.28□□□□□ -0.12
PCDH1Q08174 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDH1Q08174 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.28□□□□□ -0.12
PCDH1Q08174 IGHV3-72-202ENST00000621503 303 ntBASIC14.28□□□□□ -0.12
PCDH1Q08174 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PCDH1Q08174 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
PCDH1Q08174 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.28□□□□□ -0.12
PCDH1Q08174 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.28□□□□□ -0.12
PCDH1Q08174 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDH1Q08174 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PCDH1Q08174 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.28□□□□□ -0.12
PCDH1Q08174 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDH1Q08174 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDH1Q08174 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PCDH1Q08174 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.28□□□□□ -0.12
PCDH1Q08174 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PCDH1Q08174 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCDH1Q08174 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
PCDH1Q08174 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCDH1Q08174 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCDH1Q08174 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCDH1Q08174 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCDH1Q08174 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.27□□□□□ -0.12
PCDH1Q08174 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.27□□□□□ -0.12
PCDH1Q08174 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PCDH1Q08174 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PCDH1Q08174 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
PCDH1Q08174 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PCDH1Q08174 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCDH1Q08174 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.27□□□□□ -0.12
PCDH1Q08174 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDH1Q08174 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDH1Q08174 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.27□□□□□ -0.13
PCDH1Q08174 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PCDH1Q08174 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
PCDH1Q08174 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PCDH1Q08174 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDH1Q08174 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.27□□□□□ -0.13
PCDH1Q08174 TTTY23B-201ENST00000442790 549 ntBASIC14.27□□□□□ -0.13
PCDH1Q08174 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.27□□□□□ -0.13
PCDH1Q08174 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PCDH1Q08174 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.27□□□□□ -0.13
PCDH1Q08174 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.27□□□□□ -0.13
PCDH1Q08174 AC132938.2-201ENST00000579188 680 ntBASIC14.27□□□□□ -0.13
PCDH1Q08174 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.27□□□□□ -0.13
PCDH1Q08174 AL591163.1-201ENST00000641757 987 ntBASIC14.27□□□□□ -0.13
PCDH1Q08174 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PCDH1Q08174 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
PCDH1Q08174 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDH1Q08174 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.27□□□□□ -0.13
PCDH1Q08174 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDH1Q08174 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.27□□□□□ -0.13
PCDH1Q08174 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDH1Q08174 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDH1Q08174 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.27□□□□□ -0.13
PCDH1Q08174 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDH1Q08174 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDH1Q08174 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
PCDH1Q08174 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDH1Q08174 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PCDH1Q08174 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.27□□□□□ -0.13
PCDH1Q08174 AC215219.1-201ENST00000400706 1817 ntBASIC14.27□□□□□ -0.13
PCDH1Q08174 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDH1Q08174 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
PCDH1Q08174 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDH1Q08174 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDH1Q08174 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDH1Q08174 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDH1Q08174 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDH1Q08174 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDH1Q08174 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCDH1Q08174 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCDH1Q08174 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDH1Q08174 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.26□□□□□ -0.13
PCDH1Q08174 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms