Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SSBP1Q04837 DLX4-206ENST00000611342 1662 ntBASIC12.53□□□□□ -0.4
SSBP1Q04837 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.53□□□□□ -0.4
SSBP1Q04837 HLA-A-201ENST00000376802 1334 ntBASIC12.53□□□□□ -0.4
SSBP1Q04837 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
SSBP1Q04837 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP1Q04837 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP1Q04837 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP1Q04837 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.53□□□□□ -0.4
SSBP1Q04837 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.53□□□□□ -0.4
SSBP1Q04837 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP1Q04837 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP1Q04837 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP1Q04837 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP1Q04837 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP1Q04837 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.53□□□□□ -0.4
SSBP1Q04837 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.53□□□□□ -0.4
SSBP1Q04837 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP1Q04837 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP1Q04837 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC12.53□□□□□ -0.4
SSBP1Q04837 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.52□□□□□ -0.4
SSBP1Q04837 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
SSBP1Q04837 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SSBP1Q04837 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SSBP1Q04837 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SSBP1Q04837 POM121L14P-201ENST00000406100 1558 ntBASIC12.52□□□□□ -0.4
SSBP1Q04837 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SSBP1Q04837 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
SSBP1Q04837 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SSBP1Q04837 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SSBP1Q04837 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.52□□□□□ -0.4
SSBP1Q04837 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
SSBP1Q04837 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
SSBP1Q04837 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SSBP1Q04837 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
SSBP1Q04837 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
SSBP1Q04837 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.52□□□□□ -0.4
SSBP1Q04837 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
SSBP1Q04837 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
SSBP1Q04837 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP1Q04837 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP1Q04837 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP1Q04837 MARK2P9-201ENST00000430958 1727 ntBASIC12.52□□□□□ -0.41
SSBP1Q04837 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
SSBP1Q04837 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
SSBP1Q04837 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP1Q04837 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP1Q04837 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.52□□□□□ -0.41
SSBP1Q04837 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP1Q04837 MCCD1P2-201ENST00000423228 335 ntBASIC12.52□□□□□ -0.41
SSBP1Q04837 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP1Q04837 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.41
SSBP1Q04837 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP1Q04837 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
SSBP1Q04837 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC12.52□□□□□ -0.41
SSBP1Q04837 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC12.52□□□□□ -0.41
SSBP1Q04837 RPL18-209ENST00000550645 463 ntTSL 5 BASIC12.52□□□□□ -0.41
SSBP1Q04837 RPL18-214ENST00000552588 559 ntTSL 3 BASIC12.52□□□□□ -0.41
SSBP1Q04837 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP1Q04837 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP1Q04837 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP1Q04837 AL731571.1-201ENST00000617058 5428 ntBASIC12.52□□□□□ -0.41
SSBP1Q04837 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP1Q04837 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.52□□□□□ -0.41
SSBP1Q04837 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
SSBP1Q04837 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP1Q04837 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC12.52□□□□□ -0.41
SSBP1Q04837 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP1Q04837 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
SSBP1Q04837 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP1Q04837 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP1Q04837 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP1Q04837 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP1Q04837 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP1Q04837 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP1Q04837 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
SSBP1Q04837 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.52□□□□□ -0.41
SSBP1Q04837 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
SSBP1Q04837 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
SSBP1Q04837 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.52□□□□□ -0.41
SSBP1Q04837 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP1Q04837 AL138799.1-201ENST00000448213 1675 ntBASIC12.51□□□□□ -0.41
SSBP1Q04837 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.51□□□□□ -0.41
SSBP1Q04837 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP1Q04837 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.51□□□□□ -0.41
SSBP1Q04837 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.51□□□□□ -0.41
SSBP1Q04837 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP1Q04837 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.51□□□□□ -0.41
SSBP1Q04837 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SSBP1Q04837 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP1Q04837 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.51□□□□□ -0.41
SSBP1Q04837 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.51□□□□□ -0.41
SSBP1Q04837 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP1Q04837 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC12.51□□□□□ -0.41
SSBP1Q04837 MED15P5-201ENST00000423150 992 ntBASIC12.51□□□□□ -0.41
SSBP1Q04837 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SSBP1Q04837 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC12.51□□□□□ -0.41
SSBP1Q04837 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC12.51□□□□□ -0.41
SSBP1Q04837 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SSBP1Q04837 AC131206.1-201ENST00000538078 1211 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms