Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-1P78426 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-1P78426 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-1P78426 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-1P78426 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
NKX6-1P78426 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-1P78426 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-1P78426 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.14□□□□□ -0.31
NKX6-1P78426 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
NKX6-1P78426 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-1P78426 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-1P78426 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.14□□□□□ -0.31
NKX6-1P78426 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-1P78426 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-1P78426 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.14□□□□□ -0.31
NKX6-1P78426 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.14□□□□□ -0.31
NKX6-1P78426 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
NKX6-1P78426 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-1P78426 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
NKX6-1P78426 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC13.14□□□□□ -0.31
NKX6-1P78426 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
NKX6-1P78426 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.14□□□□□ -0.31
NKX6-1P78426 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
NKX6-1P78426 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC13.14□□□□□ -0.31
NKX6-1P78426 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-1P78426 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.14□□□□□ -0.31
NKX6-1P78426 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.14□□□□□ -0.31
NKX6-1P78426 EEF1DP1-201ENST00000585891 896 ntBASIC13.14□□□□□ -0.31
NKX6-1P78426 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
NKX6-1P78426 KC6-205ENST00000599934 556 ntTSL 4 BASIC13.14□□□□□ -0.31
NKX6-1P78426 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-1P78426 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
NKX6-1P78426 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.14□□□□□ -0.31
NKX6-1P78426 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-1P78426 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.14□□□□□ -0.31
NKX6-1P78426 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
NKX6-1P78426 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-1P78426 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-1P78426 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-1P78426 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.14□□□□□ -0.31
NKX6-1P78426 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-1P78426 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
NKX6-1P78426 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-1P78426 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC13.13□□□□□ -0.31
NKX6-1P78426 AC015818.8-201ENST00000587907 1519 ntBASIC13.13□□□□□ -0.31
NKX6-1P78426 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX6-1P78426 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
NKX6-1P78426 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX6-1P78426 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX6-1P78426 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NKX6-1P78426 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.13□□□□□ -0.31
NKX6-1P78426 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NKX6-1P78426 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX6-1P78426 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX6-1P78426 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
NKX6-1P78426 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NKX6-1P78426 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NKX6-1P78426 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX6-1P78426 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NKX6-1P78426 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.13□□□□□ -0.31
NKX6-1P78426 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.13□□□□□ -0.31
NKX6-1P78426 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NKX6-1P78426 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX6-1P78426 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
NKX6-1P78426 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.13□□□□□ -0.31
NKX6-1P78426 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX6-1P78426 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX6-1P78426 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.13□□□□□ -0.31
NKX6-1P78426 AC012508.2-201ENST00000567613 1472 ntBASIC13.13□□□□□ -0.31
NKX6-1P78426 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX6-1P78426 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX6-1P78426 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
NKX6-1P78426 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.13□□□□□ -0.31
NKX6-1P78426 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
NKX6-1P78426 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
NKX6-1P78426 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX6-1P78426 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
NKX6-1P78426 HNRNPA1P32-201ENST00000396326 963 ntBASIC13.13□□□□□ -0.31
NKX6-1P78426 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NKX6-1P78426 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
NKX6-1P78426 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC13.13□□□□□ -0.31
NKX6-1P78426 HINT2P1-201ENST00000419438 481 ntBASIC13.13□□□□□ -0.31
NKX6-1P78426 HLA-K-203ENST00000430151 1046 ntBASIC13.13□□□□□ -0.31
NKX6-1P78426 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.13□□□□□ -0.31
NKX6-1P78426 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.13□□□□□ -0.31
NKX6-1P78426 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC13.13□□□□□ -0.31
NKX6-1P78426 MPRIPP1-201ENST00000452433 1089 ntBASIC13.13□□□□□ -0.31
NKX6-1P78426 EIF4HP1-201ENST00000453115 687 ntBASIC13.13□□□□□ -0.31
NKX6-1P78426 BX284668.4-201ENST00000453917 508 ntBASIC13.13□□□□□ -0.31
NKX6-1P78426 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.13□□□□□ -0.31
NKX6-1P78426 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
NKX6-1P78426 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC13.13□□□□□ -0.31
NKX6-1P78426 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
NKX6-1P78426 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.13□□□□□ -0.31
NKX6-1P78426 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC13.13□□□□□ -0.31
NKX6-1P78426 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.13□□□□□ -0.31
NKX6-1P78426 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX6-1P78426 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX6-1P78426 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX6-1P78426 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms