Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC12.89□□□□□ -0.35
UBA52P62987 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UBA52P62987 FADS2-205ENST00000517839 469 ntTSL 3 BASIC12.89□□□□□ -0.35
UBA52P62987 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC12.89□□□□□ -0.35
UBA52P62987 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBA52P62987 TIMM17BP1-201ENST00000545713 516 ntBASIC12.89□□□□□ -0.35
UBA52P62987 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBA52P62987 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBA52P62987 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBA52P62987 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.89□□□□□ -0.35
UBA52P62987 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBA52P62987 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBA52P62987 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.89□□□□□ -0.35
UBA52P62987 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBA52P62987 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBA52P62987 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBA52P62987 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.89□□□□□ -0.35
UBA52P62987 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBA52P62987 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.89□□□□□ -0.35
UBA52P62987 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBA52P62987 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBA52P62987 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
UBA52P62987 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UBA52P62987 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
UBA52P62987 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
UBA52P62987 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
UBA52P62987 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
UBA52P62987 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBA52P62987 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
UBA52P62987 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
UBA52P62987 NUTM2HP-201ENST00000442076 2498 ntBASIC12.88□□□□□ -0.35
UBA52P62987 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
UBA52P62987 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBA52P62987 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
UBA52P62987 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.88□□□□□ -0.35
UBA52P62987 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBA52P62987 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.88□□□□□ -0.35
UBA52P62987 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.88□□□□□ -0.35
UBA52P62987 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
UBA52P62987 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBA52P62987 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBA52P62987 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
UBA52P62987 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.88□□□□□ -0.35
UBA52P62987 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.88□□□□□ -0.35
UBA52P62987 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBA52P62987 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
UBA52P62987 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBA52P62987 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.88□□□□□ -0.35
UBA52P62987 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBA52P62987 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBA52P62987 HIST1H2BPS3-201ENST00000419683 341 ntBASIC12.88□□□□□ -0.35
UBA52P62987 AC098850.1-201ENST00000419919 790 ntBASIC12.88□□□□□ -0.35
UBA52P62987 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC12.88□□□□□ -0.35
UBA52P62987 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC12.88□□□□□ -0.35
UBA52P62987 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC12.88□□□□□ -0.35
UBA52P62987 AC092658.1-201ENST00000505836 891 ntBASIC12.88□□□□□ -0.35
UBA52P62987 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.88□□□□□ -0.35
UBA52P62987 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC12.88□□□□□ -0.35
UBA52P62987 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC12.88□□□□□ -0.35
UBA52P62987 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC12.88□□□□□ -0.35
UBA52P62987 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
UBA52P62987 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.88□□□□□ -0.35
UBA52P62987 AP005482.1-201ENST00000563722 1273 ntBASIC12.88□□□□□ -0.35
UBA52P62987 AC092337.1-201ENST00000568699 1129 ntBASIC12.88□□□□□ -0.35
UBA52P62987 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
UBA52P62987 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.88□□□□□ -0.35
UBA52P62987 AC074044.1-201ENST00000609673 707 ntBASIC12.88□□□□□ -0.35
UBA52P62987 AC133552.6-201ENST00000613406 534 ntBASIC12.88□□□□□ -0.35
UBA52P62987 WFDC1-204ENST00000613603 549 ntBASIC12.88□□□□□ -0.35
UBA52P62987 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
UBA52P62987 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.88□□□□□ -0.35
UBA52P62987 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBA52P62987 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBA52P62987 AP001267.2-201ENST00000532619 2086 ntBASIC12.88□□□□□ -0.35
UBA52P62987 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBA52P62987 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.88□□□□□ -0.35
UBA52P62987 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
UBA52P62987 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
UBA52P62987 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBA52P62987 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBA52P62987 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
UBA52P62987 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
UBA52P62987 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.88□□□□□ -0.35
UBA52P62987 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.88□□□□□ -0.35
UBA52P62987 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC12.88□□□□□ -0.35
UBA52P62987 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBA52P62987 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBA52P62987 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
UBA52P62987 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.87□□□□□ -0.35
UBA52P62987 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
UBA52P62987 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.87□□□□□ -0.35
UBA52P62987 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.87□□□□□ -0.35
UBA52P62987 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.87□□□□□ -0.35
UBA52P62987 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
UBA52P62987 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBA52P62987 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.87□□□□□ -0.35
UBA52P62987 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.87□□□□□ -0.35
UBA52P62987 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
UBA52P62987 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBA52P62987 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms