Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PER3P56645 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PER3P56645 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
PER3P56645 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PER3P56645 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PER3P56645 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PER3P56645 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PER3P56645 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
PER3P56645 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.82□□□□□ -0.2
PER3P56645 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PER3P56645 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
PER3P56645 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
PER3P56645 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
PER3P56645 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PER3P56645 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.81□□□□□ -0.2
PER3P56645 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PER3P56645 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
PER3P56645 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PER3P56645 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.81□□□□□ -0.2
PER3P56645 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.81□□□□□ -0.2
PER3P56645 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.81□□□□□ -0.2
PER3P56645 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PER3P56645 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PER3P56645 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.81□□□□□ -0.2
PER3P56645 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
PER3P56645 FXNP2-201ENST00000411625 547 ntBASIC13.81□□□□□ -0.2
PER3P56645 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
PER3P56645 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.81□□□□□ -0.2
PER3P56645 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.81□□□□□ -0.2
PER3P56645 POM121L10P-201ENST00000436994 1285 ntBASIC13.81□□□□□ -0.2
PER3P56645 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PER3P56645 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.81□□□□□ -0.2
PER3P56645 RN7SL769P-201ENST00000469386 295 ntBASIC13.81□□□□□ -0.2
PER3P56645 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC13.81□□□□□ -0.2
PER3P56645 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.81□□□□□ -0.2
PER3P56645 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.81□□□□□ -0.2
PER3P56645 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC13.81□□□□□ -0.2
PER3P56645 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC13.81□□□□□ -0.2
PER3P56645 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.81□□□□□ -0.2
PER3P56645 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PER3P56645 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC13.81□□□□□ -0.2
PER3P56645 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.81□□□□□ -0.2
PER3P56645 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
PER3P56645 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.81□□□□□ -0.2
PER3P56645 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC13.81□□□□□ -0.2
PER3P56645 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC13.81□□□□□ -0.2
PER3P56645 AC145423.3-201ENST00000615987 467 ntBASIC13.81□□□□□ -0.2
PER3P56645 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
PER3P56645 AC006453.4-201ENST00000636949 1252 ntBASIC13.81□□□□□ -0.2
PER3P56645 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PER3P56645 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
PER3P56645 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PER3P56645 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PER3P56645 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PER3P56645 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
PER3P56645 CR383656.2-201ENST00000548656 2254 ntBASIC13.81□□□□□ -0.2
PER3P56645 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.81□□□□□ -0.2
PER3P56645 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PER3P56645 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
PER3P56645 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.81□□□□□ -0.2
PER3P56645 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PER3P56645 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PER3P56645 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PER3P56645 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
PER3P56645 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.81□□□□□ -0.2
PER3P56645 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PER3P56645 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
PER3P56645 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.81□□□□□ -0.2
PER3P56645 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PER3P56645 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PER3P56645 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PER3P56645 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PER3P56645 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
PER3P56645 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.8□□□□□ -0.2
PER3P56645 AL354989.2-201ENST00000435838 1540 ntBASIC13.8□□□□□ -0.2
PER3P56645 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PER3P56645 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PER3P56645 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
PER3P56645 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
PER3P56645 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PER3P56645 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
PER3P56645 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
PER3P56645 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PER3P56645 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
PER3P56645 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PER3P56645 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PER3P56645 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PER3P56645 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.8□□□□□ -0.2
PER3P56645 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PER3P56645 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PER3P56645 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PER3P56645 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
PER3P56645 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC13.8□□□□□ -0.2
PER3P56645 AL008707.1-201ENST00000422498 534 ntBASIC13.8□□□□□ -0.2
PER3P56645 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC13.8□□□□□ -0.2
PER3P56645 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PER3P56645 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.8□□□□□ -0.2
PER3P56645 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.8□□□□□ -0.2
PER3P56645 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC13.8□□□□□ -0.2
PER3P56645 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms