Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 PEG13-201ENST00000631594 5667 ntBASIC13.85□□□□□ -0.19
CDH12P55289 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH12P55289 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDH12P55289 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH12P55289 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH12P55289 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDH12P55289 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH12P55289 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDH12P55289 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CDH12P55289 CICP17-201ENST00000418553 2377 ntBASIC13.85□□□□□ -0.19
CDH12P55289 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDH12P55289 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH12P55289 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.85□□□□□ -0.19
CDH12P55289 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.85□□□□□ -0.19
CDH12P55289 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CDH12P55289 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.85□□□□□ -0.19
CDH12P55289 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.85□□□□□ -0.19
CDH12P55289 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.85□□□□□ -0.19
CDH12P55289 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDH12P55289 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.85□□□□□ -0.19
CDH12P55289 BRI3BPP1-201ENST00000594224 787 ntBASIC13.85□□□□□ -0.19
CDH12P55289 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH12P55289 AC093813.1-201ENST00000605066 256 ntBASIC13.85□□□□□ -0.19
CDH12P55289 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.85□□□□□ -0.19
CDH12P55289 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.85□□□□□ -0.19
CDH12P55289 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH12P55289 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH12P55289 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CDH12P55289 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH12P55289 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH12P55289 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CDH12P55289 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH12P55289 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.85□□□□□ -0.19
CDH12P55289 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.85□□□□□ -0.19
CDH12P55289 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH12P55289 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDH12P55289 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CDH12P55289 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CDH12P55289 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH12P55289 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CDH12P55289 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.85□□□□□ -0.19
CDH12P55289 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.85□□□□□ -0.19
CDH12P55289 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CDH12P55289 INE2-201ENST00000630399 1874 ntBASIC13.84□□□□□ -0.19
CDH12P55289 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH12P55289 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CDH12P55289 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CDH12P55289 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CDH12P55289 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CDH12P55289 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH12P55289 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH12P55289 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CDH12P55289 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH12P55289 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CDH12P55289 AL137784.3-201ENST00000623858 2288 ntBASIC13.84□□□□□ -0.19
CDH12P55289 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH12P55289 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CDH12P55289 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
CDH12P55289 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH12P55289 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH12P55289 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CDH12P55289 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH12P55289 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
CDH12P55289 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CDH12P55289 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CDH12P55289 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.84□□□□□ -0.19
CDH12P55289 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CDH12P55289 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.84□□□□□ -0.19
CDH12P55289 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH12P55289 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CDH12P55289 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CDH12P55289 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.84□□□□□ -0.19
CDH12P55289 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CDH12P55289 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.84□□□□□ -0.19
CDH12P55289 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.84□□□□□ -0.19
CDH12P55289 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.84□□□□□ -0.19
CDH12P55289 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.84□□□□□ -0.19
CDH12P55289 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.84□□□□□ -0.19
CDH12P55289 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CDH12P55289 RRP7BP-205ENST00000566851 833 ntBASIC13.84□□□□□ -0.19
CDH12P55289 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.84□□□□□ -0.19
CDH12P55289 MIR8072-201ENST00000614241 80 ntBASIC13.84□□□□□ -0.19
CDH12P55289 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.84□□□□□ -0.19
CDH12P55289 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.84□□□□□ -0.19
CDH12P55289 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH12P55289 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CDH12P55289 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.84□□□□□ -0.19
CDH12P55289 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.84□□□□□ -0.19
CDH12P55289 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH12P55289 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CDH12P55289 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CDH12P55289 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CDH12P55289 AC005252.3-201ENST00000623855 2258 ntBASIC13.84□□□□□ -0.19
CDH12P55289 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH12P55289 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CDH12P55289 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CDH12P55289 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CDH12P55289 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CDH12P55289 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CDH12P55289 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms