Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LHX2P50458 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LHX2P50458 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
LHX2P50458 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
LHX2P50458 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
LHX2P50458 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
LHX2P50458 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LHX2P50458 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LHX2P50458 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LHX2P50458 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.14□□□□□ -0.31
LHX2P50458 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LHX2P50458 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LHX2P50458 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
LHX2P50458 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LHX2P50458 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LHX2P50458 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.14□□□□□ -0.31
LHX2P50458 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
LHX2P50458 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
LHX2P50458 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.14□□□□□ -0.31
LHX2P50458 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LHX2P50458 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
LHX2P50458 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.14□□□□□ -0.31
LHX2P50458 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LHX2P50458 SLC16A6P1-201ENST00000413214 1059 ntBASIC13.14□□□□□ -0.31
LHX2P50458 CYP46A4P-201ENST00000414953 267 ntBASIC13.14□□□□□ -0.31
LHX2P50458 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.14□□□□□ -0.31
LHX2P50458 AC078875.1-201ENST00000431907 724 ntBASIC13.14□□□□□ -0.31
LHX2P50458 SPTLC1P5-201ENST00000450718 252 ntBASIC13.14□□□□□ -0.31
LHX2P50458 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LHX2P50458 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
LHX2P50458 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LHX2P50458 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.14□□□□□ -0.31
LHX2P50458 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.14□□□□□ -0.31
LHX2P50458 NEU3-202ENST00000526068 431 ntTSL 2 BASIC13.14□□□□□ -0.31
LHX2P50458 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.14□□□□□ -0.31
LHX2P50458 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC13.14□□□□□ -0.31
LHX2P50458 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC13.14□□□□□ -0.31
LHX2P50458 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.14□□□□□ -0.31
LHX2P50458 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LHX2P50458 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LHX2P50458 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LHX2P50458 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
LHX2P50458 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LHX2P50458 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LHX2P50458 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
LHX2P50458 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LHX2P50458 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
LHX2P50458 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
LHX2P50458 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LHX2P50458 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LHX2P50458 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.14□□□□□ -0.31
LHX2P50458 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.14□□□□□ -0.31
LHX2P50458 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.14□□□□□ -0.31
LHX2P50458 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.14□□□□□ -0.31
LHX2P50458 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
LHX2P50458 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LHX2P50458 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LHX2P50458 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.13□□□□□ -0.31
LHX2P50458 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
LHX2P50458 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LHX2P50458 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.13□□□□□ -0.31
LHX2P50458 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LHX2P50458 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
LHX2P50458 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LHX2P50458 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LHX2P50458 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LHX2P50458 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LHX2P50458 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LHX2P50458 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LHX2P50458 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
LHX2P50458 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LHX2P50458 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LHX2P50458 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LHX2P50458 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.13□□□□□ -0.31
LHX2P50458 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
LHX2P50458 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.13□□□□□ -0.31
LHX2P50458 RCC2P8-201ENST00000502779 1035 ntBASIC13.13□□□□□ -0.31
LHX2P50458 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.13□□□□□ -0.31
LHX2P50458 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.13□□□□□ -0.31
LHX2P50458 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC13.13□□□□□ -0.31
LHX2P50458 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.13□□□□□ -0.31
LHX2P50458 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.13□□□□□ -0.31
LHX2P50458 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC13.13□□□□□ -0.31
LHX2P50458 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.13□□□□□ -0.31
LHX2P50458 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.13□□□□□ -0.31
LHX2P50458 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC13.13□□□□□ -0.31
LHX2P50458 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC13.13□□□□□ -0.31
LHX2P50458 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LHX2P50458 RN7SL774P-201ENST00000577467 290 ntBASIC13.13□□□□□ -0.31
LHX2P50458 AC091544.8-201ENST00000619490 361 ntBASIC13.13□□□□□ -0.31
LHX2P50458 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC13.13□□□□□ -0.31
LHX2P50458 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
LHX2P50458 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.13□□□□□ -0.31
LHX2P50458 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
LHX2P50458 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
LHX2P50458 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.13□□□□□ -0.31
LHX2P50458 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.13□□□□□ -0.31
LHX2P50458 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
LHX2P50458 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
LHX2P50458 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms