Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC16.19■□□□□ 0.18
CENPFP49454 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
CENPFP49454 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
CENPFP49454 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.19■□□□□ 0.18
CENPFP49454 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CENPFP49454 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CENPFP49454 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CENPFP49454 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CENPFP49454 VENTXP4-201ENST00000449029 958 ntBASIC16.19■□□□□ 0.18
CENPFP49454 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CENPFP49454 RN7SL530P-201ENST00000485097 298 ntBASIC16.19■□□□□ 0.18
CENPFP49454 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC16.19■□□□□ 0.18
CENPFP49454 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CENPFP49454 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CENPFP49454 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CENPFP49454 AL365181.3-201ENST00000605886 3222 ntBASIC16.19■□□□□ 0.18
CENPFP49454 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CENPFP49454 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CENPFP49454 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.19■□□□□ 0.18
CENPFP49454 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CENPFP49454 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CENPFP49454 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.19■□□□□ 0.18
CENPFP49454 AC027612.2-202ENST00000445955 1199 ntBASIC16.19■□□□□ 0.18
CENPFP49454 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CENPFP49454 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC16.19■□□□□ 0.18
CENPFP49454 PHF23-213ENST00000613632 850 ntTSL 5 BASIC16.19■□□□□ 0.18
CENPFP49454 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CENPFP49454 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CENPFP49454 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC16.18■□□□□ 0.18
CENPFP49454 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CENPFP49454 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC16.18■□□□□ 0.18
CENPFP49454 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CENPFP49454 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CENPFP49454 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CENPFP49454 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CENPFP49454 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CENPFP49454 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CENPFP49454 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CENPFP49454 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CENPFP49454 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CENPFP49454 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC16.18■□□□□ 0.18
CENPFP49454 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CENPFP49454 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.18■□□□□ 0.18
CENPFP49454 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CENPFP49454 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CENPFP49454 AC139749.1-202ENST00000617529 3139 ntBASIC16.18■□□□□ 0.18
CENPFP49454 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.18■□□□□ 0.18
CENPFP49454 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
CENPFP49454 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CENPFP49454 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CENPFP49454 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CENPFP49454 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CENPFP49454 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CENPFP49454 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CENPFP49454 OLA1P2-201ENST00000395519 1264 ntBASIC16.18■□□□□ 0.18
CENPFP49454 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC16.18■□□□□ 0.18
CENPFP49454 COQ4-204ENST00000608951 781 ntTSL 2 BASIC16.18■□□□□ 0.18
CENPFP49454 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CENPFP49454 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CENPFP49454 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.18■□□□□ 0.18
CENPFP49454 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC16.18■□□□□ 0.18
CENPFP49454 PXK-210ENST00000479241 2817 ntTSL 2 BASIC16.18■□□□□ 0.18
CENPFP49454 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CENPFP49454 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.18■□□□□ 0.18
CENPFP49454 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CENPFP49454 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CENPFP49454 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CENPFP49454 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CENPFP49454 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CENPFP49454 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CENPFP49454 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC16.17■□□□□ 0.18
CENPFP49454 RN7SL578P-201ENST00000477781 283 ntBASIC16.17■□□□□ 0.18
CENPFP49454 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC16.17■□□□□ 0.18
CENPFP49454 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC16.17■□□□□ 0.18
CENPFP49454 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC16.17■□□□□ 0.18
CENPFP49454 AC006986.1-201ENST00000612764 241 ntBASIC16.17■□□□□ 0.18
CENPFP49454 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CENPFP49454 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CENPFP49454 AC117503.4-201ENST00000623229 1418 ntBASIC16.17■□□□□ 0.18
CENPFP49454 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CENPFP49454 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CENPFP49454 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CENPFP49454 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.17■□□□□ 0.18
CENPFP49454 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC16.17■□□□□ 0.18
CENPFP49454 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CENPFP49454 IFNWP2-201ENST00000431203 580 ntBASIC16.17■□□□□ 0.18
CENPFP49454 KRT8P30-201ENST00000432100 650 ntBASIC16.17■□□□□ 0.18
CENPFP49454 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC16.17■□□□□ 0.18
CENPFP49454 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC16.17■□□□□ 0.18
CENPFP49454 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC16.17■□□□□ 0.18
CENPFP49454 AC139713.2-207ENST00000641556 1292 ntBASIC16.17■□□□□ 0.18
CENPFP49454 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.17■□□□□ 0.18
CENPFP49454 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.17■□□□□ 0.18
CENPFP49454 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CENPFP49454 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.17■□□□□ 0.18
CENPFP49454 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CENPFP49454 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
CENPFP49454 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CENPFP49454 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.17■□□□□ 0.18
CENPFP49454 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms