Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 GRK6P1-201ENST00000400595 1711 ntBASIC13.21□□□□□ -0.3
CSNK1A1P48729 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.21□□□□□ -0.3
CSNK1A1P48729 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CSNK1A1P48729 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
CSNK1A1P48729 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
CSNK1A1P48729 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.21□□□□□ -0.3
CSNK1A1P48729 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CSNK1A1P48729 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.21□□□□□ -0.3
CSNK1A1P48729 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.21□□□□□ -0.3
CSNK1A1P48729 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CSNK1A1P48729 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.2□□□□□ -0.3
CSNK1A1P48729 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSNK1A1P48729 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSNK1A1P48729 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.2□□□□□ -0.3
CSNK1A1P48729 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSNK1A1P48729 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.2□□□□□ -0.3
CSNK1A1P48729 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CSNK1A1P48729 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.2□□□□□ -0.3
CSNK1A1P48729 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSNK1A1P48729 AC005912.2-201ENST00000619492 2400 ntBASIC13.2□□□□□ -0.3
CSNK1A1P48729 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSNK1A1P48729 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.2□□□□□ -0.3
CSNK1A1P48729 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSNK1A1P48729 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.2□□□□□ -0.3
CSNK1A1P48729 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CSNK1A1P48729 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CSNK1A1P48729 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSNK1A1P48729 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CSNK1A1P48729 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSNK1A1P48729 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CSNK1A1P48729 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSNK1A1P48729 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSNK1A1P48729 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSNK1A1P48729 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CSNK1A1P48729 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CSNK1A1P48729 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CSNK1A1P48729 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSNK1A1P48729 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.2□□□□□ -0.3
CSNK1A1P48729 FAM8A4P-201ENST00000435433 1213 ntBASIC13.2□□□□□ -0.3
CSNK1A1P48729 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSNK1A1P48729 AL391280.1-201ENST00000506969 1062 ntBASIC13.2□□□□□ -0.3
CSNK1A1P48729 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CSNK1A1P48729 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.2□□□□□ -0.3
CSNK1A1P48729 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
CSNK1A1P48729 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.2□□□□□ -0.3
CSNK1A1P48729 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.2□□□□□ -0.3
CSNK1A1P48729 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.2□□□□□ -0.3
CSNK1A1P48729 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.2□□□□□ -0.3
CSNK1A1P48729 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.2□□□□□ -0.3
CSNK1A1P48729 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.2□□□□□ -0.3
CSNK1A1P48729 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.2□□□□□ -0.3
CSNK1A1P48729 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.2□□□□□ -0.3
CSNK1A1P48729 OR10B1P-201ENST00000601666 907 ntBASIC13.2□□□□□ -0.3
CSNK1A1P48729 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CSNK1A1P48729 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CSNK1A1P48729 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CSNK1A1P48729 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSNK1A1P48729 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.2□□□□□ -0.3
CSNK1A1P48729 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.2□□□□□ -0.3
CSNK1A1P48729 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.2□□□□□ -0.3
CSNK1A1P48729 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.2□□□□□ -0.3
CSNK1A1P48729 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CSNK1A1P48729 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CSNK1A1P48729 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSNK1A1P48729 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSNK1A1P48729 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CSNK1A1P48729 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CSNK1A1P48729 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.2□□□□□ -0.3
CSNK1A1P48729 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.2□□□□□ -0.3
CSNK1A1P48729 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CSNK1A1P48729 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
CSNK1A1P48729 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
CSNK1A1P48729 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.19□□□□□ -0.3
CSNK1A1P48729 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1A1P48729 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CSNK1A1P48729 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1A1P48729 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.19□□□□□ -0.3
CSNK1A1P48729 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1A1P48729 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1A1P48729 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1A1P48729 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1A1P48729 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1A1P48729 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1A1P48729 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CSNK1A1P48729 AC020910.5-201ENST00000623668 1865 ntBASIC13.19□□□□□ -0.3
CSNK1A1P48729 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1A1P48729 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1A1P48729 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1A1P48729 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.19□□□□□ -0.3
CSNK1A1P48729 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1A1P48729 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
CSNK1A1P48729 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1A1P48729 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CSNK1A1P48729 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1A1P48729 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1A1P48729 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1A1P48729 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.19□□□□□ -0.3
CSNK1A1P48729 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.19□□□□□ -0.3
CSNK1A1P48729 CD8B2-202ENST00000417670 633 ntBASIC13.19□□□□□ -0.3
CSNK1A1P48729 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms