Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA4P43681 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRNA4P43681 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA4P43681 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA4P43681 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.92□□□□□ -0.02
CHRNA4P43681 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA4P43681 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA4P43681 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA4P43681 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
CHRNA4P43681 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA4P43681 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRNA4P43681 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CHRNA4P43681 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.92□□□□□ -0.02
CHRNA4P43681 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA4P43681 AC215219.1-201ENST00000400706 1817 ntBASIC14.92□□□□□ -0.02
CHRNA4P43681 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA4P43681 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.92□□□□□ -0.02
CHRNA4P43681 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA4P43681 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.92□□□□□ -0.02
CHRNA4P43681 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNA4P43681 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNA4P43681 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNA4P43681 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNA4P43681 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.91□□□□□ -0.02
CHRNA4P43681 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNA4P43681 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNA4P43681 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNA4P43681 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNA4P43681 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.91□□□□□ -0.02
CHRNA4P43681 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.91□□□□□ -0.02
CHRNA4P43681 PUDPP3-201ENST00000445368 636 ntBASIC14.91□□□□□ -0.02
CHRNA4P43681 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.91□□□□□ -0.02
CHRNA4P43681 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNA4P43681 ACA64.2-201ENST00000459014 129 ntBASIC14.91□□□□□ -0.02
CHRNA4P43681 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.91□□□□□ -0.02
CHRNA4P43681 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.91□□□□□ -0.02
CHRNA4P43681 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CHRNA4P43681 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.91□□□□□ -0.02
CHRNA4P43681 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.91□□□□□ -0.02
CHRNA4P43681 AP006547.1-201ENST00000563435 692 ntBASIC14.91□□□□□ -0.02
CHRNA4P43681 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.91□□□□□ -0.02
CHRNA4P43681 PPY2P-201ENST00000582808 702 ntBASIC14.91□□□□□ -0.02
CHRNA4P43681 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNA4P43681 AL358472.3-201ENST00000608147 415 ntBASIC14.91□□□□□ -0.02
CHRNA4P43681 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CHRNA4P43681 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNA4P43681 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CHRNA4P43681 HSPA7-201ENST00000445535 1927 ntBASIC14.91□□□□□ -0.02
CHRNA4P43681 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNA4P43681 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNA4P43681 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNA4P43681 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.91□□□□□ -0.02
CHRNA4P43681 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.91□□□□□ -0.02
CHRNA4P43681 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNA4P43681 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNA4P43681 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNA4P43681 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNA4P43681 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.91□□□□□ -0.02
CHRNA4P43681 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNA4P43681 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
CHRNA4P43681 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
CHRNA4P43681 AC139712.1-201ENST00000378256 1875 ntBASIC14.91□□□□□ -0.02
CHRNA4P43681 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNA4P43681 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CHRNA4P43681 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CHRNA4P43681 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.9□□□□□ -0.02
CHRNA4P43681 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA4P43681 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CHRNA4P43681 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA4P43681 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CHRNA4P43681 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA4P43681 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.9□□□□□ -0.02
CHRNA4P43681 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.9□□□□□ -0.02
CHRNA4P43681 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA4P43681 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA4P43681 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.9□□□□□ -0.02
CHRNA4P43681 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.9□□□□□ -0.02
CHRNA4P43681 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA4P43681 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA4P43681 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA4P43681 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA4P43681 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.9□□□□□ -0.02
CHRNA4P43681 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CHRNA4P43681 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA4P43681 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA4P43681 BOLA2P3-201ENST00000404566 256 ntBASIC14.9□□□□□ -0.02
CHRNA4P43681 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CHRNA4P43681 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA4P43681 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA4P43681 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA4P43681 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.9□□□□□ -0.02
CHRNA4P43681 CNN2P10-201ENST00000443067 918 ntBASIC14.9□□□□□ -0.02
CHRNA4P43681 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.9□□□□□ -0.02
CHRNA4P43681 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA4P43681 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.9□□□□□ -0.02
CHRNA4P43681 ALG3P1-201ENST00000508806 1114 ntBASIC14.9□□□□□ -0.02
CHRNA4P43681 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.9□□□□□ -0.02
CHRNA4P43681 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.9□□□□□ -0.02
CHRNA4P43681 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA4P43681 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms