Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
COPB2P35606 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
COPB2P35606 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.84■□□□□ 0.29
COPB2P35606 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COPB2P35606 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
COPB2P35606 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.83■□□□□ 0.29
COPB2P35606 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.83■□□□□ 0.29
COPB2P35606 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.83■□□□□ 0.29
COPB2P35606 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
COPB2P35606 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
COPB2P35606 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
COPB2P35606 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
COPB2P35606 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COPB2P35606 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COPB2P35606 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
COPB2P35606 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COPB2P35606 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COPB2P35606 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COPB2P35606 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COPB2P35606 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COPB2P35606 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COPB2P35606 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COPB2P35606 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COPB2P35606 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COPB2P35606 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COPB2P35606 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COPB2P35606 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
COPB2P35606 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
COPB2P35606 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COPB2P35606 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.83■□□□□ 0.28
COPB2P35606 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COPB2P35606 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.83■□□□□ 0.28
COPB2P35606 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.83■□□□□ 0.28
COPB2P35606 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.83■□□□□ 0.28
COPB2P35606 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.83■□□□□ 0.28
COPB2P35606 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COPB2P35606 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
COPB2P35606 TPM1-223ENST00000560445 485 ntTSL 3 BASIC16.83■□□□□ 0.28
COPB2P35606 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.83■□□□□ 0.28
COPB2P35606 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.83■□□□□ 0.28
COPB2P35606 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COPB2P35606 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC16.83■□□□□ 0.28
COPB2P35606 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.83■□□□□ 0.28
COPB2P35606 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.83■□□□□ 0.28
COPB2P35606 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.83■□□□□ 0.28
COPB2P35606 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
COPB2P35606 LINC01783-202ENST00000614408 828 ntBASIC16.83■□□□□ 0.28
COPB2P35606 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COPB2P35606 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COPB2P35606 MIR6769A-201ENST00000617340 73 ntBASIC16.83■□□□□ 0.28
COPB2P35606 BX284668.2-205ENST00000619677 828 ntBASIC16.83■□□□□ 0.28
COPB2P35606 COX6A1P2-201ENST00000620597 330 ntBASIC16.83■□□□□ 0.28
COPB2P35606 CDK7-214ENST00000626796 358 ntTSL 5 BASIC16.83■□□□□ 0.28
COPB2P35606 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC16.83■□□□□ 0.28
COPB2P35606 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
COPB2P35606 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COPB2P35606 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COPB2P35606 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COPB2P35606 AC091951.1-201ENST00000512854 2465 ntBASIC16.82■□□□□ 0.28
COPB2P35606 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.82■□□□□ 0.28
COPB2P35606 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COPB2P35606 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COPB2P35606 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.82■□□□□ 0.28
COPB2P35606 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COPB2P35606 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.82■□□□□ 0.28
COPB2P35606 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.82■□□□□ 0.28
COPB2P35606 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COPB2P35606 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COPB2P35606 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.82■□□□□ 0.28
COPB2P35606 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COPB2P35606 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.82■□□□□ 0.28
COPB2P35606 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COPB2P35606 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.82■□□□□ 0.28
COPB2P35606 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COPB2P35606 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COPB2P35606 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COPB2P35606 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COPB2P35606 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COPB2P35606 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COPB2P35606 RAN-210ENST00000541630 1475 ntTSL 2 BASIC16.82■□□□□ 0.28
COPB2P35606 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
COPB2P35606 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
COPB2P35606 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COPB2P35606 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC16.82■□□□□ 0.28
COPB2P35606 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COPB2P35606 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
COPB2P35606 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
COPB2P35606 IGF1-203ENST00000392904 761 ntTSL 5 BASIC16.82■□□□□ 0.28
COPB2P35606 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COPB2P35606 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC16.82■□□□□ 0.28
COPB2P35606 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COPB2P35606 AC026320.2-201ENST00000434379 478 ntBASIC16.82■□□□□ 0.28
COPB2P35606 RN7SL67P-201ENST00000492147 296 ntBASIC16.82■□□□□ 0.28
COPB2P35606 PARP8-206ENST00000503665 572 ntTSL 4 BASIC16.82■□□□□ 0.28
COPB2P35606 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16.82■□□□□ 0.28
COPB2P35606 AC026803.1-201ENST00000569130 274 ntBASIC16.82■□□□□ 0.28
COPB2P35606 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC16.82■□□□□ 0.28
COPB2P35606 NAT9-220ENST00000582870 896 ntTSL 5 BASIC16.82■□□□□ 0.28
COPB2P35606 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC16.82■□□□□ 0.28
COPB2P35606 AC103810.10-201ENST00000606504 343 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms