Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HOXC12P31275 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HOXC12P31275 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.2□□□□□ -0.3
HOXC12P31275 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
HOXC12P31275 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HOXC12P31275 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
HOXC12P31275 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
HOXC12P31275 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
HOXC12P31275 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.2□□□□□ -0.3
HOXC12P31275 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HOXC12P31275 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
HOXC12P31275 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
HOXC12P31275 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.2□□□□□ -0.3
HOXC12P31275 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
HOXC12P31275 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HOXC12P31275 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HOXC12P31275 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HOXC12P31275 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.2□□□□□ -0.3
HOXC12P31275 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HOXC12P31275 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HOXC12P31275 MIR1202-201ENST00000408529 83 ntBASIC13.2□□□□□ -0.3
HOXC12P31275 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
HOXC12P31275 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.2□□□□□ -0.3
HOXC12P31275 FNTAP2-201ENST00000430308 634 ntBASIC13.2□□□□□ -0.3
HOXC12P31275 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC13.2□□□□□ -0.3
HOXC12P31275 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.2□□□□□ -0.3
HOXC12P31275 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.2□□□□□ -0.3
HOXC12P31275 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
HOXC12P31275 FTLP10-202ENST00000505798 471 ntBASIC13.2□□□□□ -0.3
HOXC12P31275 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HOXC12P31275 AC105129.2-201ENST00000559536 390 ntBASIC13.2□□□□□ -0.3
HOXC12P31275 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC13.2□□□□□ -0.3
HOXC12P31275 AP006547.1-201ENST00000563435 692 ntBASIC13.2□□□□□ -0.3
HOXC12P31275 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
HOXC12P31275 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HOXC12P31275 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HOXC12P31275 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
HOXC12P31275 AC023157.3-201ENST00000619086 2088 ntBASIC13.2□□□□□ -0.3
HOXC12P31275 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
HOXC12P31275 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
HOXC12P31275 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HOXC12P31275 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
HOXC12P31275 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
HOXC12P31275 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HOXC12P31275 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HOXC12P31275 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HOXC12P31275 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HOXC12P31275 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HOXC12P31275 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
HOXC12P31275 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.2□□□□□ -0.3
HOXC12P31275 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HOXC12P31275 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.2□□□□□ -0.3
HOXC12P31275 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC13.2□□□□□ -0.3
HOXC12P31275 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
HOXC12P31275 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HOXC12P31275 SON-203ENST00000381679 7860 ntTSL 5 BASIC13.2□□□□□ -0.3
HOXC12P31275 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HOXC12P31275 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HOXC12P31275 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
HOXC12P31275 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
HOXC12P31275 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
HOXC12P31275 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HOXC12P31275 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HOXC12P31275 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC13.19□□□□□ -0.3
HOXC12P31275 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HOXC12P31275 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
HOXC12P31275 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
HOXC12P31275 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.19□□□□□ -0.3
HOXC12P31275 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HOXC12P31275 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HOXC12P31275 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HOXC12P31275 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
HOXC12P31275 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HOXC12P31275 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
HOXC12P31275 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HOXC12P31275 REXO1L1P-201ENST00000379010 6598 ntBASIC13.19□□□□□ -0.3
HOXC12P31275 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HOXC12P31275 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HOXC12P31275 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HOXC12P31275 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
HOXC12P31275 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
HOXC12P31275 FXNP2-201ENST00000411625 547 ntBASIC13.19□□□□□ -0.3
HOXC12P31275 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
HOXC12P31275 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC13.19□□□□□ -0.3
HOXC12P31275 UPF3AP2-201ENST00000457924 1132 ntBASIC13.19□□□□□ -0.3
HOXC12P31275 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC13.19□□□□□ -0.3
HOXC12P31275 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.19□□□□□ -0.3
HOXC12P31275 ADM-202ENST00000524948 584 ntTSL 2 BASIC13.19□□□□□ -0.3
HOXC12P31275 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
HOXC12P31275 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC13.19□□□□□ -0.3
HOXC12P31275 DUX4L47-201ENST00000566374 394 ntBASIC13.19□□□□□ -0.3
HOXC12P31275 NAT9-224ENST00000583757 583 ntTSL 3 BASIC13.19□□□□□ -0.3
HOXC12P31275 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HOXC12P31275 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HOXC12P31275 AC020914.3-201ENST00000594712 304 ntBASIC13.19□□□□□ -0.3
HOXC12P31275 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.19□□□□□ -0.3
HOXC12P31275 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
HOXC12P31275 AC005695.3-201ENST00000614522 232 ntBASIC13.19□□□□□ -0.3
HOXC12P31275 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13.19□□□□□ -0.3
HOXC12P31275 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms