Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
SHC1P29353 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHC1P29353 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.62□□□□□ -0.23
SHC1P29353 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHC1P29353 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHC1P29353 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHC1P29353 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHC1P29353 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHC1P29353 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SHC1P29353 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHC1P29353 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SHC1P29353 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.62□□□□□ -0.23
SHC1P29353 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.62□□□□□ -0.23
SHC1P29353 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.62□□□□□ -0.23
SHC1P29353 FAM197Y7-201ENST00000432892 766 ntBASIC13.62□□□□□ -0.23
SHC1P29353 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SHC1P29353 AC007551.1-201ENST00000457394 519 ntBASIC13.62□□□□□ -0.23
SHC1P29353 ACA64.2-201ENST00000459014 129 ntBASIC13.62□□□□□ -0.23
SHC1P29353 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.62□□□□□ -0.23
SHC1P29353 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SHC1P29353 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHC1P29353 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.62□□□□□ -0.23
SHC1P29353 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SHC1P29353 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.62□□□□□ -0.23
SHC1P29353 RAB43P1-201ENST00000561790 589 ntBASIC13.62□□□□□ -0.23
SHC1P29353 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.62□□□□□ -0.23
SHC1P29353 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.62□□□□□ -0.23
SHC1P29353 AC106886.1-201ENST00000568660 600 ntBASIC13.62□□□□□ -0.23
SHC1P29353 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.62□□□□□ -0.23
SHC1P29353 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.62□□□□□ -0.23
SHC1P29353 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.62□□□□□ -0.23
SHC1P29353 ECM1P1-201ENST00000604092 1279 ntBASIC13.62□□□□□ -0.23
SHC1P29353 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC13.62□□□□□ -0.23
SHC1P29353 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.62□□□□□ -0.23
SHC1P29353 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHC1P29353 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.62□□□□□ -0.23
SHC1P29353 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHC1P29353 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
SHC1P29353 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHC1P29353 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.62□□□□□ -0.23
SHC1P29353 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SHC1P29353 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SHC1P29353 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.62□□□□□ -0.23
SHC1P29353 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHC1P29353 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
SHC1P29353 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.62□□□□□ -0.23
SHC1P29353 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHC1P29353 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHC1P29353 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.62□□□□□ -0.23
SHC1P29353 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SHC1P29353 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.62□□□□□ -0.23
SHC1P29353 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.62□□□□□ -0.23
SHC1P29353 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.62□□□□□ -0.23
SHC1P29353 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHC1P29353 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SHC1P29353 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.62□□□□□ -0.23
SHC1P29353 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHC1P29353 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHC1P29353 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
SHC1P29353 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHC1P29353 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SHC1P29353 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SHC1P29353 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHC1P29353 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.61□□□□□ -0.23
SHC1P29353 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHC1P29353 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHC1P29353 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHC1P29353 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHC1P29353 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SHC1P29353 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SHC1P29353 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHC1P29353 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHC1P29353 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHC1P29353 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SHC1P29353 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHC1P29353 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
SHC1P29353 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHC1P29353 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHC1P29353 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHC1P29353 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.61□□□□□ -0.23
SHC1P29353 MIR1909-201ENST00000411312 80 ntBASIC13.61□□□□□ -0.23
SHC1P29353 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SHC1P29353 KRT43P-201ENST00000434019 910 ntBASIC13.61□□□□□ -0.23
SHC1P29353 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.61□□□□□ -0.23
SHC1P29353 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.61□□□□□ -0.23
SHC1P29353 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.61□□□□□ -0.23
SHC1P29353 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.61□□□□□ -0.23
SHC1P29353 KRT90P-201ENST00000549264 1064 ntBASIC13.61□□□□□ -0.23
SHC1P29353 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.61□□□□□ -0.23
SHC1P29353 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.61□□□□□ -0.23
SHC1P29353 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.61□□□□□ -0.23
SHC1P29353 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.61□□□□□ -0.23
SHC1P29353 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHC1P29353 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.61□□□□□ -0.23
SHC1P29353 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.61□□□□□ -0.23
SHC1P29353 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
SHC1P29353 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHC1P29353 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.61□□□□□ -0.23
SHC1P29353 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.61□□□□□ -0.23
SHC1P29353 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 213.2 ms