Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CD40P25942 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CD40P25942 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CD40P25942 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD40P25942 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC12.72□□□□□ -0.37
CD40P25942 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CD40P25942 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.72□□□□□ -0.37
CD40P25942 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC12.72□□□□□ -0.37
CD40P25942 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CD40P25942 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD40P25942 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CD40P25942 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CD40P25942 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
CD40P25942 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CD40P25942 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD40P25942 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CD40P25942 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CD40P25942 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC12.72□□□□□ -0.37
CD40P25942 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD40P25942 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CD40P25942 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD40P25942 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CD40P25942 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CD40P25942 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CD40P25942 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD40P25942 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.72□□□□□ -0.37
CD40P25942 CYP46A4P-201ENST00000414953 267 ntBASIC12.72□□□□□ -0.37
CD40P25942 VDAC1P1-201ENST00000439229 848 ntBASIC12.72□□□□□ -0.37
CD40P25942 SPTLC1P5-201ENST00000450718 252 ntBASIC12.72□□□□□ -0.37
CD40P25942 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD40P25942 AC125604.1-201ENST00000496255 707 ntBASIC12.72□□□□□ -0.37
CD40P25942 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC12.72□□□□□ -0.37
CD40P25942 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC12.72□□□□□ -0.37
CD40P25942 SCARNA21-201ENST00000517026 139 ntBASIC12.72□□□□□ -0.37
CD40P25942 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.72□□□□□ -0.37
CD40P25942 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CD40P25942 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
CD40P25942 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD40P25942 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC12.72□□□□□ -0.37
CD40P25942 AL805961.1-203ENST00000641078 1258 ntBASIC12.72□□□□□ -0.37
CD40P25942 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CD40P25942 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.72□□□□□ -0.37
CD40P25942 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD40P25942 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CD40P25942 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC12.72□□□□□ -0.37
CD40P25942 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD40P25942 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CD40P25942 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD40P25942 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CD40P25942 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CD40P25942 OR2I1P-209ENST00000641730 5365 ntBASIC12.72□□□□□ -0.37
CD40P25942 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CD40P25942 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD40P25942 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CD40P25942 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
CD40P25942 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC12.72□□□□□ -0.37
CD40P25942 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD40P25942 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD40P25942 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD40P25942 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CD40P25942 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CD40P25942 POR-201ENST00000394893 2532 ntTSL 5 BASIC12.71□□□□□ -0.37
CD40P25942 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CD40P25942 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
CD40P25942 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CD40P25942 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
CD40P25942 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CD40P25942 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
CD40P25942 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC12.71□□□□□ -0.37
CD40P25942 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CD40P25942 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC12.71□□□□□ -0.37
CD40P25942 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CD40P25942 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CD40P25942 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
CD40P25942 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CD40P25942 AL662890.1-201ENST00000396818 632 ntBASIC12.71□□□□□ -0.37
CD40P25942 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.71□□□□□ -0.37
CD40P25942 SLC16A6P1-201ENST00000413214 1059 ntBASIC12.71□□□□□ -0.37
CD40P25942 AL645933.1-201ENST00000440087 609 ntBASIC12.71□□□□□ -0.37
CD40P25942 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CD40P25942 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
CD40P25942 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CD40P25942 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC12.71□□□□□ -0.37
CD40P25942 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CD40P25942 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.71□□□□□ -0.37
CD40P25942 AL160314.3-201ENST00000556041 767 ntBASIC12.71□□□□□ -0.37
CD40P25942 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC12.71□□□□□ -0.37
CD40P25942 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CD40P25942 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.71□□□□□ -0.37
CD40P25942 AL132994.2-201ENST00000603120 687 ntBASIC12.71□□□□□ -0.37
CD40P25942 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC12.71□□□□□ -0.37
CD40P25942 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.71□□□□□ -0.37
CD40P25942 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
CD40P25942 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
CD40P25942 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CD40P25942 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
CD40P25942 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
CD40P25942 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CD40P25942 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CD40P25942 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms