Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.21■□□□□ 0.03
ERCC2P18074 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.21■□□□□ 0.03
ERCC2P18074 AP005482.1-201ENST00000563722 1273 ntBASIC15.21■□□□□ 0.03
ERCC2P18074 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.21■□□□□ 0.03
ERCC2P18074 MIR4259-201ENST00000584466 101 ntBASIC15.21■□□□□ 0.03
ERCC2P18074 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.21■□□□□ 0.03
ERCC2P18074 AC239800.4-201ENST00000603712 296 ntBASIC15.21■□□□□ 0.03
ERCC2P18074 AC017083.2-201ENST00000608069 979 ntBASIC15.21■□□□□ 0.03
ERCC2P18074 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
ERCC2P18074 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.21■□□□□ 0.03
ERCC2P18074 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ERCC2P18074 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.21■□□□□ 0.03
ERCC2P18074 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.21■□□□□ 0.03
ERCC2P18074 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ERCC2P18074 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ERCC2P18074 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.02
ERCC2P18074 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ERCC2P18074 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ERCC2P18074 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
ERCC2P18074 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.21■□□□□ 0.02
ERCC2P18074 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.02
ERCC2P18074 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ERCC2P18074 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
ERCC2P18074 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ERCC2P18074 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.2■□□□□ 0.02
ERCC2P18074 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ERCC2P18074 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ERCC2P18074 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.2■□□□□ 0.02
ERCC2P18074 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ERCC2P18074 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ERCC2P18074 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ERCC2P18074 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ERCC2P18074 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
ERCC2P18074 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ERCC2P18074 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
ERCC2P18074 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ERCC2P18074 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ERCC2P18074 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.2■□□□□ 0.02
ERCC2P18074 AC215219.1-201ENST00000400706 1817 ntBASIC15.2■□□□□ 0.02
ERCC2P18074 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.2■□□□□ 0.02
ERCC2P18074 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
ERCC2P18074 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ERCC2P18074 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ERCC2P18074 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ERCC2P18074 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ERCC2P18074 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ERCC2P18074 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ERCC2P18074 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ERCC2P18074 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ERCC2P18074 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.2■□□□□ 0.02
ERCC2P18074 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.2■□□□□ 0.02
ERCC2P18074 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ERCC2P18074 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
ERCC2P18074 HIST2H2BB-201ENST00000449108 381 ntBASIC15.2■□□□□ 0.02
ERCC2P18074 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ERCC2P18074 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ERCC2P18074 IGHV3-71-201ENST00000523324 359 ntBASIC15.2■□□□□ 0.02
ERCC2P18074 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.2■□□□□ 0.02
ERCC2P18074 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.2■□□□□ 0.02
ERCC2P18074 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ERCC2P18074 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ERCC2P18074 AC133552.6-201ENST00000613406 534 ntBASIC15.2■□□□□ 0.02
ERCC2P18074 AL136301.1-201ENST00000615830 422 ntBASIC15.2■□□□□ 0.02
ERCC2P18074 COX11-210ENST00000639671 696 ntBASIC15.2■□□□□ 0.02
ERCC2P18074 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ERCC2P18074 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
ERCC2P18074 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ERCC2P18074 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.2■□□□□ 0.02
ERCC2P18074 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ERCC2P18074 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
ERCC2P18074 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.2■□□□□ 0.02
ERCC2P18074 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ERCC2P18074 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ERCC2P18074 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ERCC2P18074 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
ERCC2P18074 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ERCC2P18074 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
ERCC2P18074 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
ERCC2P18074 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.19■□□□□ 0.02
ERCC2P18074 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ERCC2P18074 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ERCC2P18074 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ERCC2P18074 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ERCC2P18074 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
ERCC2P18074 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ERCC2P18074 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
ERCC2P18074 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ERCC2P18074 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ERCC2P18074 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.19■□□□□ 0.02
ERCC2P18074 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ERCC2P18074 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.19■□□□□ 0.02
ERCC2P18074 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ERCC2P18074 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.19■□□□□ 0.02
ERCC2P18074 MIR658-201ENST00000385210 100 ntBASIC15.19■□□□□ 0.02
ERCC2P18074 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.19■□□□□ 0.02
ERCC2P18074 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ERCC2P18074 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.19■□□□□ 0.02
ERCC2P18074 KRT223P-202ENST00000449164 1292 ntBASIC15.19■□□□□ 0.02
ERCC2P18074 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
ERCC2P18074 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms