Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
CD28P10747 NPPA-201ENST00000376476 728 ntTSL 3 BASIC11.59□□□□□ -0.55
CD28P10747 AK6-201ENST00000380818 1183 ntTSL 2 BASIC11.59□□□□□ -0.55
CD28P10747 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
CD28P10747 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC11.59□□□□□ -0.55
CD28P10747 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC11.59□□□□□ -0.55
CD28P10747 ACTG1P2-201ENST00000415776 1125 ntBASIC11.59□□□□□ -0.55
CD28P10747 ACTG1P11-201ENST00000425411 1125 ntBASIC11.59□□□□□ -0.55
CD28P10747 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC11.59□□□□□ -0.55
CD28P10747 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC11.59□□□□□ -0.55
CD28P10747 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC11.59□□□□□ -0.55
CD28P10747 RN7SL769P-201ENST00000469386 295 ntBASIC11.59□□□□□ -0.55
CD28P10747 RPL18P13-201ENST00000478088 569 ntBASIC11.59□□□□□ -0.55
CD28P10747 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC11.59□□□□□ -0.55
CD28P10747 RN7SL720P-201ENST00000488178 304 ntBASIC11.59□□□□□ -0.55
CD28P10747 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC11.59□□□□□ -0.55
CD28P10747 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC11.59□□□□□ -0.55
CD28P10747 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
CD28P10747 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC11.59□□□□□ -0.55
CD28P10747 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC11.59□□□□□ -0.55
CD28P10747 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC11.59□□□□□ -0.55
CD28P10747 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC11.59□□□□□ -0.55
CD28P10747 AC016629.1-201ENST00000596579 586 ntBASIC11.59□□□□□ -0.55
CD28P10747 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC11.59□□□□□ -0.55
CD28P10747 PCBP2-OT1-201ENST00000634357 590 ntBASIC11.59□□□□□ -0.55
CD28P10747 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CD28P10747 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CD28P10747 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC11.59□□□□□ -0.55
CD28P10747 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
CD28P10747 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CD28P10747 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC11.59□□□□□ -0.55
CD28P10747 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CD28P10747 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC11.59□□□□□ -0.55
CD28P10747 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC11.59□□□□□ -0.55
CD28P10747 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CD28P10747 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CD28P10747 AC136621.1-201ENST00000624017 2304 ntBASIC11.59□□□□□ -0.55
CD28P10747 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CD28P10747 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CD28P10747 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC11.59□□□□□ -0.55
CD28P10747 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
CD28P10747 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC11.59□□□□□ -0.55
CD28P10747 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CD28P10747 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CD28P10747 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CD28P10747 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CD28P10747 AL138725.1-201ENST00000407347 1314 ntBASIC11.59□□□□□ -0.55
CD28P10747 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
CD28P10747 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CD28P10747 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC11.59□□□□□ -0.55
CD28P10747 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
CD28P10747 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
CD28P10747 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
CD28P10747 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
CD28P10747 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CD28P10747 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
CD28P10747 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC11.58□□□□□ -0.56
CD28P10747 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CD28P10747 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
CD28P10747 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CD28P10747 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CD28P10747 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CD28P10747 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CD28P10747 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
CD28P10747 AC008132.1-202ENST00000342005 1389 ntBASIC11.58□□□□□ -0.56
CD28P10747 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC11.58□□□□□ -0.56
CD28P10747 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
CD28P10747 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CD28P10747 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
CD28P10747 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CD28P10747 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CD28P10747 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CD28P10747 AC010141.1-201ENST00000411585 623 ntBASIC11.58□□□□□ -0.56
CD28P10747 SLC16A6P1-201ENST00000413214 1059 ntBASIC11.58□□□□□ -0.56
CD28P10747 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC11.58□□□□□ -0.56
CD28P10747 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC11.58□□□□□ -0.56
CD28P10747 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC11.58□□□□□ -0.56
CD28P10747 CSH2-206ENST00000560142 749 ntTSL 5 BASIC11.58□□□□□ -0.56
CD28P10747 FGFR3P5-201ENST00000564496 886 ntBASIC11.58□□□□□ -0.56
CD28P10747 SYT17-208ENST00000568433 812 ntTSL 3 BASIC11.58□□□□□ -0.56
CD28P10747 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CD28P10747 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CD28P10747 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC11.58□□□□□ -0.56
CD28P10747 AC090164.2-201ENST00000611487 516 ntBASIC11.58□□□□□ -0.56
CD28P10747 AL136295.7-201ENST00000619226 1200 ntBASIC11.58□□□□□ -0.56
CD28P10747 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CD28P10747 AC015967.2-201ENST00000624092 234 ntBASIC11.58□□□□□ -0.56
CD28P10747 AC006435.4-201ENST00000625037 234 ntBASIC11.58□□□□□ -0.56
CD28P10747 AC100757.4-201ENST00000626934 759 ntBASIC11.58□□□□□ -0.56
CD28P10747 AL356737.1-201ENST00000634391 234 ntBASIC11.58□□□□□ -0.56
CD28P10747 AL805961.1-203ENST00000641078 1258 ntBASIC11.58□□□□□ -0.56
CD28P10747 AC068587.8-201ENST00000641239 219 ntBASIC11.58□□□□□ -0.56
CD28P10747 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
CD28P10747 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
CD28P10747 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
CD28P10747 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC11.58□□□□□ -0.56
CD28P10747 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CD28P10747 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CD28P10747 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CD28P10747 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms