Protein–RNA interactions for Protein: P0DN86

CGB3, Choriogonadotropin subunit beta 3, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB3P0DN86 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CGB3P0DN86 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.1□□□□□ -0.47
CGB3P0DN86 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CGB3P0DN86 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.1□□□□□ -0.47
CGB3P0DN86 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC12.1□□□□□ -0.47
CGB3P0DN86 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.1□□□□□ -0.47
CGB3P0DN86 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC12.1□□□□□ -0.47
CGB3P0DN86 CTBP2P5-201ENST00000454986 1264 ntBASIC12.1□□□□□ -0.47
CGB3P0DN86 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CGB3P0DN86 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CGB3P0DN86 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
CGB3P0DN86 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC12.1□□□□□ -0.47
CGB3P0DN86 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CGB3P0DN86 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC12.1□□□□□ -0.47
CGB3P0DN86 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC12.1□□□□□ -0.47
CGB3P0DN86 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CGB3P0DN86 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.1□□□□□ -0.47
CGB3P0DN86 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CGB3P0DN86 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CGB3P0DN86 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.1□□□□□ -0.47
CGB3P0DN86 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CGB3P0DN86 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CGB3P0DN86 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CGB3P0DN86 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CGB3P0DN86 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC12.1□□□□□ -0.47
CGB3P0DN86 SHC1P1-201ENST00000425230 1745 ntBASIC12.1□□□□□ -0.47
CGB3P0DN86 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.1□□□□□ -0.47
CGB3P0DN86 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CGB3P0DN86 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CGB3P0DN86 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.1□□□□□ -0.47
CGB3P0DN86 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CGB3P0DN86 AL928921.2-201ENST00000641325 2442 ntBASIC12.1□□□□□ -0.47
CGB3P0DN86 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CGB3P0DN86 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.1□□□□□ -0.47
CGB3P0DN86 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.1□□□□□ -0.47
CGB3P0DN86 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CGB3P0DN86 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.1□□□□□ -0.47
CGB3P0DN86 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CGB3P0DN86 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CGB3P0DN86 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
CGB3P0DN86 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CGB3P0DN86 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CGB3P0DN86 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CGB3P0DN86 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CGB3P0DN86 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CGB3P0DN86 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CGB3P0DN86 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CGB3P0DN86 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
CGB3P0DN86 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CGB3P0DN86 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CGB3P0DN86 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
CGB3P0DN86 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.09□□□□□ -0.47
CGB3P0DN86 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.09□□□□□ -0.47
CGB3P0DN86 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.09□□□□□ -0.47
CGB3P0DN86 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
CGB3P0DN86 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CGB3P0DN86 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CGB3P0DN86 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CGB3P0DN86 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
CGB3P0DN86 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CGB3P0DN86 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CGB3P0DN86 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CGB3P0DN86 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
CGB3P0DN86 ANKRD19P-201ENST00000338192 862 ntBASIC12.09□□□□□ -0.47
CGB3P0DN86 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CGB3P0DN86 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CGB3P0DN86 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC12.09□□□□□ -0.47
CGB3P0DN86 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC12.09□□□□□ -0.47
CGB3P0DN86 HOMER2P2-201ENST00000451621 847 ntBASIC12.09□□□□□ -0.47
CGB3P0DN86 NCK2-206ENST00000522586 490 ntTSL 5 BASIC12.09□□□□□ -0.47
CGB3P0DN86 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
CGB3P0DN86 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.09□□□□□ -0.47
CGB3P0DN86 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC12.09□□□□□ -0.47
CGB3P0DN86 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
CGB3P0DN86 AC023310.1-201ENST00000554836 735 ntBASIC12.09□□□□□ -0.47
CGB3P0DN86 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.09□□□□□ -0.47
CGB3P0DN86 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.09□□□□□ -0.47
CGB3P0DN86 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC12.09□□□□□ -0.47
CGB3P0DN86 AC104506.1-201ENST00000609247 429 ntBASIC12.09□□□□□ -0.47
CGB3P0DN86 AL136301.1-201ENST00000615830 422 ntBASIC12.09□□□□□ -0.47
CGB3P0DN86 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.09□□□□□ -0.47
CGB3P0DN86 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.09□□□□□ -0.47
CGB3P0DN86 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.09□□□□□ -0.47
CGB3P0DN86 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CGB3P0DN86 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CGB3P0DN86 TCAM1P-207ENST00000485295 1537 ntBASIC12.09□□□□□ -0.47
CGB3P0DN86 PCDHA3-202ENST00000532566 4594 ntBASIC12.09□□□□□ -0.47
CGB3P0DN86 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CGB3P0DN86 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
CGB3P0DN86 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.09□□□□□ -0.47
CGB3P0DN86 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.09□□□□□ -0.47
CGB3P0DN86 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CGB3P0DN86 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CGB3P0DN86 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CGB3P0DN86 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CGB3P0DN86 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
CGB3P0DN86 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CGB3P0DN86 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CGB3P0DN86 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CGB3P0DN86 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms