Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.91□□□□□ -0.02
RETP07949 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
RETP07949 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
RETP07949 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RETP07949 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.91□□□□□ -0.02
RETP07949 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC14.91□□□□□ -0.02
RETP07949 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC14.91□□□□□ -0.02
RETP07949 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.91□□□□□ -0.02
RETP07949 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.91□□□□□ -0.02
RETP07949 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC14.91□□□□□ -0.02
RETP07949 AC009779.1-201ENST00000551138 283 ntBASIC14.91□□□□□ -0.02
RETP07949 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC14.91□□□□□ -0.02
RETP07949 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RETP07949 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RETP07949 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RETP07949 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RETP07949 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RETP07949 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RETP07949 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.91□□□□□ -0.02
RETP07949 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
RETP07949 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RETP07949 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RETP07949 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RETP07949 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RETP07949 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RETP07949 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RETP07949 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.9□□□□□ -0.02
RETP07949 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.9□□□□□ -0.02
RETP07949 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RETP07949 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.9□□□□□ -0.02
RETP07949 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
RETP07949 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RETP07949 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RETP07949 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RETP07949 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.9□□□□□ -0.02
RETP07949 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RETP07949 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.9□□□□□ -0.02
RETP07949 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
RETP07949 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.9□□□□□ -0.02
RETP07949 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RETP07949 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RETP07949 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RETP07949 FAM90A2P-201ENST00000511144 1395 ntBASIC14.9□□□□□ -0.02
RETP07949 FAM90A25P-201ENST00000528404 1395 ntBASIC14.9□□□□□ -0.02
RETP07949 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RETP07949 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RETP07949 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.9□□□□□ -0.02
RETP07949 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
RETP07949 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RETP07949 AC239868.1-201ENST00000369385 493 ntBASIC14.9□□□□□ -0.02
RETP07949 AP000356.3-201ENST00000382243 753 ntBASIC14.9□□□□□ -0.02
RETP07949 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC14.9□□□□□ -0.02
RETP07949 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RETP07949 IGHV3-37-201ENST00000518544 340 ntBASIC14.9□□□□□ -0.02
RETP07949 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.9□□□□□ -0.02
RETP07949 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.9□□□□□ -0.02
RETP07949 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.9□□□□□ -0.02
RETP07949 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.9□□□□□ -0.02
RETP07949 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC14.9□□□□□ -0.02
RETP07949 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC14.9□□□□□ -0.02
RETP07949 MIR4783-201ENST00000580343 82 ntBASIC14.9□□□□□ -0.02
RETP07949 AL358472.3-201ENST00000608147 415 ntBASIC14.9□□□□□ -0.02
RETP07949 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.9□□□□□ -0.02
RETP07949 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.9□□□□□ -0.02
RETP07949 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.9□□□□□ -0.02
RETP07949 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.9□□□□□ -0.02
RETP07949 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RETP07949 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RETP07949 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RETP07949 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RETP07949 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.9□□□□□ -0.02
RETP07949 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RETP07949 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RETP07949 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RETP07949 FGD5P1-202ENST00000614866 2498 ntBASIC14.9□□□□□ -0.02
RETP07949 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.9□□□□□ -0.02
RETP07949 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RETP07949 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RETP07949 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RETP07949 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RETP07949 AP000593.2-201ENST00000542775 1433 ntBASIC14.9□□□□□ -0.02
RETP07949 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RETP07949 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RETP07949 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RETP07949 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.9□□□□□ -0.02
RETP07949 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.9□□□□□ -0.02
RETP07949 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.9□□□□□ -0.02
RETP07949 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RETP07949 FKBP4P6-201ENST00000457486 1332 ntBASIC14.9□□□□□ -0.02
RETP07949 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
RETP07949 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RETP07949 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RETP07949 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RETP07949 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RETP07949 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RETP07949 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RETP07949 AC007191.1-201ENST00000623179 2995 ntBASIC14.89□□□□□ -0.03
RETP07949 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RETP07949 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RETP07949 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms