Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN1P07384 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.65□□□□□ -0.06
CAPN1P07384 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.07
CAPN1P07384 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.64□□□□□ -0.07
CAPN1P07384 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CAPN1P07384 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CAPN1P07384 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.64□□□□□ -0.07
CAPN1P07384 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CAPN1P07384 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CAPN1P07384 GRK6P1-201ENST00000400595 1711 ntBASIC14.64□□□□□ -0.07
CAPN1P07384 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
CAPN1P07384 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CAPN1P07384 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CAPN1P07384 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CAPN1P07384 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.64□□□□□ -0.07
CAPN1P07384 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CAPN1P07384 ACKR1-201ENST00000368121 1240 ntBASIC14.64□□□□□ -0.07
CAPN1P07384 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.64□□□□□ -0.07
CAPN1P07384 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CAPN1P07384 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.64□□□□□ -0.07
CAPN1P07384 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CAPN1P07384 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CAPN1P07384 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.64□□□□□ -0.07
CAPN1P07384 AC099336.1-201ENST00000417053 1171 ntBASIC14.64□□□□□ -0.07
CAPN1P07384 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.64□□□□□ -0.07
CAPN1P07384 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.64□□□□□ -0.07
CAPN1P07384 RPL7P3-201ENST00000441388 714 ntBASIC14.64□□□□□ -0.07
CAPN1P07384 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.64□□□□□ -0.07
CAPN1P07384 AC022137.2-201ENST00000503482 481 ntBASIC14.64□□□□□ -0.07
CAPN1P07384 AC106760.1-201ENST00000508690 800 ntBASIC14.64□□□□□ -0.07
CAPN1P07384 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.64□□□□□ -0.07
CAPN1P07384 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.64□□□□□ -0.07
CAPN1P07384 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.64□□□□□ -0.07
CAPN1P07384 AP000812.2-201ENST00000538934 718 ntBASIC14.64□□□□□ -0.07
CAPN1P07384 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.64□□□□□ -0.07
CAPN1P07384 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.64□□□□□ -0.07
CAPN1P07384 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.64□□□□□ -0.07
CAPN1P07384 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.64□□□□□ -0.07
CAPN1P07384 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.64□□□□□ -0.07
CAPN1P07384 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CAPN1P07384 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
CAPN1P07384 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CAPN1P07384 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CAPN1P07384 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
CAPN1P07384 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.64□□□□□ -0.07
CAPN1P07384 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CAPN1P07384 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.64□□□□□ -0.07
CAPN1P07384 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CAPN1P07384 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CAPN1P07384 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.64□□□□□ -0.07
CAPN1P07384 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CAPN1P07384 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CAPN1P07384 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.64□□□□□ -0.07
CAPN1P07384 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CAPN1P07384 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.64□□□□□ -0.07
CAPN1P07384 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CAPN1P07384 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.64□□□□□ -0.07
CAPN1P07384 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.64□□□□□ -0.07
CAPN1P07384 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN1P07384 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN1P07384 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN1P07384 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN1P07384 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.63□□□□□ -0.07
CAPN1P07384 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN1P07384 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.63□□□□□ -0.07
CAPN1P07384 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN1P07384 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN1P07384 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN1P07384 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.63□□□□□ -0.07
CAPN1P07384 REXO1L6P-201ENST00000603433 1515 ntBASIC14.63□□□□□ -0.07
CAPN1P07384 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN1P07384 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CAPN1P07384 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN1P07384 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN1P07384 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN1P07384 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN1P07384 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN1P07384 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN1P07384 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN1P07384 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CAPN1P07384 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.63□□□□□ -0.07
CAPN1P07384 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN1P07384 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN1P07384 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.63□□□□□ -0.07
CAPN1P07384 AL355864.2-201ENST00000447420 863 ntBASIC14.63□□□□□ -0.07
CAPN1P07384 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.63□□□□□ -0.07
CAPN1P07384 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.63□□□□□ -0.07
CAPN1P07384 AC007551.1-201ENST00000457394 519 ntBASIC14.63□□□□□ -0.07
CAPN1P07384 FTH1P14-201ENST00000482930 551 ntBASIC14.63□□□□□ -0.07
CAPN1P07384 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.63□□□□□ -0.07
CAPN1P07384 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.63□□□□□ -0.07
CAPN1P07384 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.63□□□□□ -0.07
CAPN1P07384 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
CAPN1P07384 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.63□□□□□ -0.07
CAPN1P07384 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.63□□□□□ -0.07
CAPN1P07384 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CAPN1P07384 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CAPN1P07384 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN1P07384 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN1P07384 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms