Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CTNSO60931 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CTNSO60931 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CTNSO60931 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CTNSO60931 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.85□□□□□ -0.19
CTNSO60931 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CTNSO60931 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CTNSO60931 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.85□□□□□ -0.19
CTNSO60931 AL590440.2-201ENST00000641973 1595 ntBASIC13.85□□□□□ -0.19
CTNSO60931 AC007686.3-201ENST00000619017 3487 ntBASIC13.85□□□□□ -0.19
CTNSO60931 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CTNSO60931 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.85□□□□□ -0.19
CTNSO60931 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.85□□□□□ -0.19
CTNSO60931 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.85□□□□□ -0.19
CTNSO60931 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CTNSO60931 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CTNSO60931 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CTNSO60931 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.85□□□□□ -0.19
CTNSO60931 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CTNSO60931 FAM86HP-204ENST00000513466 959 ntBASIC13.85□□□□□ -0.19
CTNSO60931 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CTNSO60931 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CTNSO60931 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.85□□□□□ -0.19
CTNSO60931 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.85□□□□□ -0.19
CTNSO60931 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.85□□□□□ -0.19
CTNSO60931 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CTNSO60931 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CTNSO60931 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CTNSO60931 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CTNSO60931 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CTNSO60931 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.85□□□□□ -0.19
CTNSO60931 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CTNSO60931 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CTNSO60931 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CTNSO60931 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
CTNSO60931 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CTNSO60931 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CTNSO60931 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CTNSO60931 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CTNSO60931 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CTNSO60931 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CTNSO60931 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTNSO60931 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CTNSO60931 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTNSO60931 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTNSO60931 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTNSO60931 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTNSO60931 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.84□□□□□ -0.19
CTNSO60931 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CTNSO60931 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTNSO60931 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CTNSO60931 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.84□□□□□ -0.19
CTNSO60931 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.84□□□□□ -0.19
CTNSO60931 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.84□□□□□ -0.19
CTNSO60931 KHSRPP1-201ENST00000427983 1768 ntBASIC13.84□□□□□ -0.19
CTNSO60931 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTNSO60931 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTNSO60931 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTNSO60931 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CTNSO60931 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CTNSO60931 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CTNSO60931 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTNSO60931 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTNSO60931 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTNSO60931 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTNSO60931 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTNSO60931 AL354877.1-201ENST00000424412 413 ntBASIC13.84□□□□□ -0.19
CTNSO60931 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.84□□□□□ -0.19
CTNSO60931 HSPB1P2-201ENST00000448722 546 ntBASIC13.84□□□□□ -0.19
CTNSO60931 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CTNSO60931 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CTNSO60931 AC022447.6-201ENST00000515522 438 ntBASIC13.84□□□□□ -0.19
CTNSO60931 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.84□□□□□ -0.19
CTNSO60931 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.84□□□□□ -0.19
CTNSO60931 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CTNSO60931 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.84□□□□□ -0.19
CTNSO60931 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.84□□□□□ -0.19
CTNSO60931 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.84□□□□□ -0.19
CTNSO60931 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CTNSO60931 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CTNSO60931 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.84□□□□□ -0.19
CTNSO60931 AC009955.4-201ENST00000597192 544 ntBASIC13.84□□□□□ -0.19
CTNSO60931 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.84□□□□□ -0.19
CTNSO60931 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.84□□□□□ -0.19
CTNSO60931 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.84□□□□□ -0.19
CTNSO60931 AL033527.4-201ENST00000641026 673 ntBASIC13.84□□□□□ -0.19
CTNSO60931 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.84□□□□□ -0.19
CTNSO60931 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTNSO60931 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTNSO60931 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTNSO60931 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.84□□□□□ -0.19
CTNSO60931 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.84□□□□□ -0.19
CTNSO60931 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CTNSO60931 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.84□□□□□ -0.19
CTNSO60931 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.84□□□□□ -0.19
CTNSO60931 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CTNSO60931 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTNSO60931 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTNSO60931 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.84□□□□□ -0.19
CTNSO60931 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 158.3 ms