Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC16.86■□□□□ 0.29
ATP2A1O14983 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.86■□□□□ 0.29
ATP2A1O14983 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.86■□□□□ 0.29
ATP2A1O14983 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.86■□□□□ 0.29
ATP2A1O14983 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.86■□□□□ 0.29
ATP2A1O14983 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.86■□□□□ 0.29
ATP2A1O14983 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
ATP2A1O14983 STK26-204ENST00000481105 1835 ntTSL 2 BASIC16.86■□□□□ 0.29
ATP2A1O14983 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.86■□□□□ 0.29
ATP2A1O14983 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
ATP2A1O14983 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.86■□□□□ 0.29
ATP2A1O14983 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A1O14983 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A1O14983 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.86■□□□□ 0.29
ATP2A1O14983 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A1O14983 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP2A1O14983 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
ATP2A1O14983 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ATP2A1O14983 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP2A1O14983 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP2A1O14983 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ATP2A1O14983 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ATP2A1O14983 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP2A1O14983 NCR3-202ENST00000376071 541 ntTSL 5 BASIC16.85■□□□□ 0.29
ATP2A1O14983 AC026316.1-201ENST00000398900 414 ntBASIC16.85■□□□□ 0.29
ATP2A1O14983 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ATP2A1O14983 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.85■□□□□ 0.29
ATP2A1O14983 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC16.85■□□□□ 0.29
ATP2A1O14983 AC003686.1-201ENST00000550956 1034 ntBASIC16.85■□□□□ 0.29
ATP2A1O14983 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC16.85■□□□□ 0.29
ATP2A1O14983 SPCS2P2-201ENST00000603270 608 ntBASIC16.85■□□□□ 0.29
ATP2A1O14983 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
ATP2A1O14983 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC16.85■□□□□ 0.29
ATP2A1O14983 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ATP2A1O14983 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP2A1O14983 AHCYP4-201ENST00000419201 1315 ntBASIC16.85■□□□□ 0.29
ATP2A1O14983 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
ATP2A1O14983 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.85■□□□□ 0.29
ATP2A1O14983 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.85■□□□□ 0.29
ATP2A1O14983 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.85■□□□□ 0.29
ATP2A1O14983 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP2A1O14983 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.85■□□□□ 0.29
ATP2A1O14983 RAN-210ENST00000541630 1475 ntTSL 2 BASIC16.85■□□□□ 0.29
ATP2A1O14983 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ATP2A1O14983 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ATP2A1O14983 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP2A1O14983 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.85■□□□□ 0.29
ATP2A1O14983 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP2A1O14983 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP2A1O14983 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
ATP2A1O14983 AC022532.1-201ENST00000624563 1728 ntBASIC16.84■□□□□ 0.29
ATP2A1O14983 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP2A1O14983 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ATP2A1O14983 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATP2A1O14983 AC139712.1-201ENST00000378256 1875 ntBASIC16.84■□□□□ 0.29
ATP2A1O14983 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP2A1O14983 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.84■□□□□ 0.29
ATP2A1O14983 MYO15B-237ENST00000642007 4893 ntBASIC16.84■□□□□ 0.29
ATP2A1O14983 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.84■□□□□ 0.29
ATP2A1O14983 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
ATP2A1O14983 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP2A1O14983 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP2A1O14983 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC16.84■□□□□ 0.29
ATP2A1O14983 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATP2A1O14983 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC16.84■□□□□ 0.29
ATP2A1O14983 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.84■□□□□ 0.29
ATP2A1O14983 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC16.84■□□□□ 0.29
ATP2A1O14983 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC16.84■□□□□ 0.29
ATP2A1O14983 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.84■□□□□ 0.29
ATP2A1O14983 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.84■□□□□ 0.29
ATP2A1O14983 AC026803.1-201ENST00000569130 274 ntBASIC16.84■□□□□ 0.29
ATP2A1O14983 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC16.84■□□□□ 0.29
ATP2A1O14983 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC16.84■□□□□ 0.29
ATP2A1O14983 AC103691.2-201ENST00000618824 433 ntBASIC16.84■□□□□ 0.29
ATP2A1O14983 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP2A1O14983 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC16.84■□□□□ 0.29
ATP2A1O14983 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP2A1O14983 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP2A1O14983 AL136172.1-201ENST00000598590 1394 ntBASIC16.84■□□□□ 0.29
ATP2A1O14983 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP2A1O14983 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP2A1O14983 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
ATP2A1O14983 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP2A1O14983 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP2A1O14983 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP2A1O14983 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP2A1O14983 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC16.84■□□□□ 0.29
ATP2A1O14983 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP2A1O14983 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.84■□□□□ 0.29
ATP2A1O14983 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.84■□□□□ 0.29
ATP2A1O14983 AC126177.1-201ENST00000547829 2218 ntBASIC16.84■□□□□ 0.29
ATP2A1O14983 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
ATP2A1O14983 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATP2A1O14983 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATP2A1O14983 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
ATP2A1O14983 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
ATP2A1O14983 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
ATP2A1O14983 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
ATP2A1O14983 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ATP2A1O14983 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms