Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.53□□□□□ -0.08
CDC7O00311 AC132938.2-201ENST00000579188 680 ntBASIC14.53□□□□□ -0.08
CDC7O00311 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CDC7O00311 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CDC7O00311 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.53□□□□□ -0.08
CDC7O00311 AC027307.3-201ENST00000594262 1100 ntBASIC14.53□□□□□ -0.08
CDC7O00311 AP001002.3-201ENST00000623482 206 ntBASIC14.53□□□□□ -0.08
CDC7O00311 AL591163.1-201ENST00000641757 987 ntBASIC14.53□□□□□ -0.08
CDC7O00311 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDC7O00311 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CDC7O00311 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDC7O00311 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDC7O00311 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDC7O00311 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CDC7O00311 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDC7O00311 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDC7O00311 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDC7O00311 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDC7O00311 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDC7O00311 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDC7O00311 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDC7O00311 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CDC7O00311 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDC7O00311 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDC7O00311 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.53□□□□□ -0.08
CDC7O00311 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDC7O00311 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDC7O00311 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDC7O00311 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDC7O00311 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDC7O00311 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDC7O00311 CICP16-201ENST00000502609 2813 ntBASIC14.52□□□□□ -0.08
CDC7O00311 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDC7O00311 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDC7O00311 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDC7O00311 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.52□□□□□ -0.08
CDC7O00311 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDC7O00311 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDC7O00311 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDC7O00311 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDC7O00311 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CDC7O00311 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.52□□□□□ -0.08
CDC7O00311 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CDC7O00311 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.52□□□□□ -0.08
CDC7O00311 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDC7O00311 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.08
CDC7O00311 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDC7O00311 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDC7O00311 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDC7O00311 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDC7O00311 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CDC7O00311 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDC7O00311 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDC7O00311 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.52□□□□□ -0.09
CDC7O00311 AC005229.1-201ENST00000392885 409 ntBASIC14.52□□□□□ -0.09
CDC7O00311 AC092933.1-201ENST00000393644 945 ntBASIC14.52□□□□□ -0.09
CDC7O00311 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDC7O00311 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.52□□□□□ -0.09
CDC7O00311 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.52□□□□□ -0.09
CDC7O00311 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.52□□□□□ -0.09
CDC7O00311 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.52□□□□□ -0.09
CDC7O00311 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.52□□□□□ -0.09
CDC7O00311 AC103988.2-201ENST00000561804 725 ntBASIC14.52□□□□□ -0.09
CDC7O00311 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.52□□□□□ -0.09
CDC7O00311 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.52□□□□□ -0.09
CDC7O00311 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CDC7O00311 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.52□□□□□ -0.09
CDC7O00311 AC008735.3-201ENST00000596646 500 ntBASIC14.52□□□□□ -0.09
CDC7O00311 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDC7O00311 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.52□□□□□ -0.09
CDC7O00311 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CDC7O00311 AC132938.4-201ENST00000623835 848 ntBASIC14.52□□□□□ -0.09
CDC7O00311 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.52□□□□□ -0.09
CDC7O00311 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDC7O00311 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.52□□□□□ -0.09
CDC7O00311 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDC7O00311 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDC7O00311 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDC7O00311 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.52□□□□□ -0.09
CDC7O00311 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDC7O00311 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDC7O00311 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CDC7O00311 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CDC7O00311 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.52□□□□□ -0.09
CDC7O00311 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDC7O00311 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDC7O00311 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDC7O00311 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.52□□□□□ -0.09
CDC7O00311 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.52□□□□□ -0.09
CDC7O00311 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDC7O00311 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.51□□□□□ -0.09
CDC7O00311 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC7O00311 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CDC7O00311 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC7O00311 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CDC7O00311 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC7O00311 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
CDC7O00311 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.51□□□□□ -0.09
CDC7O00311 AP000593.2-201ENST00000542775 1433 ntBASIC14.51□□□□□ -0.09
CDC7O00311 AC016397.2-201ENST00000624848 1985 ntBASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms