Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 AC104457.1-201ENST00000401024 814 ntBASIC15.4■□□□□ 0.06
SRRM3A6NNA2 AC136604.1-201ENST00000418535 575 ntBASIC15.4■□□□□ 0.06
SRRM3A6NNA2 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 AC024267.1-201ENST00000582320 895 ntBASIC15.4■□□□□ 0.06
SRRM3A6NNA2 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 AC010328.2-201ENST00000597698 1111 ntBASIC15.4■□□□□ 0.06
SRRM3A6NNA2 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 AL022328.1-201ENST00000610050 478 ntBASIC15.4■□□□□ 0.06
SRRM3A6NNA2 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 KRT8P37-201ENST00000451609 1420 ntBASIC15.4■□□□□ 0.06
SRRM3A6NNA2 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 CLK3P2-201ENST00000427566 1453 ntBASIC15.4■□□□□ 0.06
SRRM3A6NNA2 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
SRRM3A6NNA2 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 AC097376.2-205ENST00000610159 5334 ntBASIC15.39■□□□□ 0.05
SRRM3A6NNA2 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 SBF1P1-201ENST00000444527 5631 ntBASIC15.39■□□□□ 0.05
SRRM3A6NNA2 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 NUS1P3-201ENST00000423502 862 ntBASIC15.39■□□□□ 0.05
SRRM3A6NNA2 RPL7P3-201ENST00000441388 714 ntBASIC15.39■□□□□ 0.05
SRRM3A6NNA2 AP001889.1-201ENST00000525414 633 ntBASIC15.39■□□□□ 0.05
SRRM3A6NNA2 NEU3-202ENST00000526068 431 ntTSL 2 BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.39■□□□□ 0.05
SRRM3A6NNA2 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 AC083964.2-201ENST00000623988 2396 ntBASIC15.39■□□□□ 0.05
SRRM3A6NNA2 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRRM3A6NNA2 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
SRRM3A6NNA2 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
SRRM3A6NNA2 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SRRM3A6NNA2 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.38■□□□□ 0.05
SRRM3A6NNA2 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
SRRM3A6NNA2 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SRRM3A6NNA2 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SRRM3A6NNA2 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms